Conservation of cofitness between B158DRAFT_2158 and B158DRAFT_2311 in Kangiella aquimarina DSM 16071

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_2158 Predicted SAM-dependent methyltransferase 1.0 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) 0.38 20
Pectobacterium carotovorum WPP14 0.40 HER17_RS16405 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.53 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB low > 75
Dickeya dadantii 3937 0.39 DDA3937_RS05060 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 74
Enterobacter asburiae PDN3 0.39 EX28DRAFT_2881 Predicted SAM-dependent methyltransferase 0.51 EX28DRAFT_0940 pseudouridine synthase low > 76
Pantoea sp. MT58 0.39 IAI47_04035 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB 0.32 4
Dickeya dianthicola 67-19 0.39 HGI48_RS05060 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 71
Dickeya dianthicola ME23 0.39 DZA65_RS05400 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB low > 75
Enterobacter sp. TBS_079 0.39 MPMX20_03669 Ribosomal RNA large subunit methyltransferase M 0.51 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B low > 85
Klebsiella michiganensis M5al 0.39 BWI76_RS22945 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 BWI76_RS11880 23S rRNA pseudouridylate synthase B 0.20 16
Escherichia coli ECRC62 0.39 BNILDI_10515 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli ECRC99 0.39 KEDOAH_08000 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli BL21 0.39 ECD_02657 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent 0.52 ECD_01245 23S rRNA pseudouridine(2605) synthase low > 61
Escherichia coli ECRC102 0.39 NIAGMN_17900 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00925 Ribosomal RNA large subunit methyltransferase M 0.52 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B 0.67 28
Escherichia coli ECRC98 0.39 JDDGAC_23795 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 86
Escherichia coli ECOR38 0.39 HEPCGN_19385 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli ECRC100 0.39 OKFHMN_20130 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 80
Escherichia coli Nissle 1917 0.39 ECOLIN_RS15640 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB low > 55
Escherichia coli ECRC101 0.39 MCAODC_10655 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli BW25113 0.39 b2806 ygdE predicted methyltransferase (NCBI) 0.52 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia coli ECOR27 0.39 NOLOHH_12010 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.52 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia fergusonii Becca 0.38 EFB2_01111 Ribosomal RNA large subunit methyltransferase M 0.52 EFB2_02658 Ribosomal large subunit pseudouridine synthase B low > 86
Shewanella sp. ANA-3 0.38 Shewana3_2891 putative RNA 2'-O-ribose methyltransferase (RefSeq) 0.55 Shewana3_1525 ribosomal large subunit pseudouridine synthase B (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF4863 'LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM' transl_table=11 0.52 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) low > 78
Shewanella loihica PV-4 0.38 Shew_2761 putative RNA 2'-O-ribose methyltransferase (RefSeq) 0.56 Shew_2246 pseudouridine synthase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.37 MIT1002_01523 Ribosomal RNA large subunit methyltransferase M 0.52 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B low > 70
Erwinia tracheiphila SCR3 0.37 LU632_RS06265 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.51 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 74
Serratia liquefaciens MT49 0.37 IAI46_20330 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.53 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB low > 86
Shewanella amazonensis SB2B 0.37 Sama_2426 putative RNA 2'-O-ribose methyltransferase (RefSeq) 0.56 Sama_2124 pseudouridine synthase, Rsu (RefSeq) 0.55 2

Not shown: 19 genomes with orthologs for B158DRAFT_2158 only; 7 genomes with orthologs for B158DRAFT_2311 only