Conservation of cofitness between Atu3915 and Atu2713 in Agrobacterium fabrum C58

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3915 MerR family transcriptional regulator 1.0 Atu2713 ABC transporter, membrane spanning protein (thiamine) 0.20 3
Sinorhizobium meliloti 1021 0.62 SMc00182 transcriptional regulator 0.49 SMc03870 thiamine transporter membrane protein — —
Rhizobium sp. OAE497 0.56 ABIE40_RS17890 redox-sensitive transcriptional activator SoxR 0.56 ABIE40_RS18630 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 107
Escherichia coli ECOR38 0.56 HEPCGN_11485 soxR redox-sensitive transcriptional activator SoxR 0.31 HEPCGN_08740 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 85
Escherichia fergusonii Becca 0.56 EFB2_04528 Redox-sensitive transcriptional activator SoxR 0.31 EFB2_03978 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.56 ECOLIN_RS23510 redox-sensitive transcriptional activator SoxR 0.31 ECOLIN_RS00365 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 52
Escherichia coli ECRC101 0.55 OKFHMN_12870 soxR redox-sensitive transcriptional activator SoxR 0.31 OKFHMN_10760 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Escherichia coli BL21 0.55 ECD_03935 redox-sensitive transcriptional activator of soxS; autorepressor 0.31 ECD_00069 thiamine/thiamine pyrophosphate ABC transporter permease low > 60
Escherichia coli ECRC99 0.55 KEDOAH_15280 soxR redox-sensitive transcriptional activator SoxR 0.31 KEDOAH_17395 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Escherichia coli BW25113 0.55 b4063 soxR DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) 0.31 b0067 thiP thiamin ABC transporter membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.55 NOLOHH_05120 soxR redox-sensitive transcriptional activator SoxR 0.31 NOLOHH_03105 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03978 Redox-sensitive transcriptional activator SoxR 0.31 OHPLBJKB_03591 hypothetical protein low > 73
Escherichia coli ECRC101 0.55 MCAODC_03380 soxR redox-sensitive transcriptional activator SoxR 0.31 MCAODC_01275 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Escherichia coli ECRC102 0.55 NIAGMN_10715 soxR redox-sensitive transcriptional activator SoxR 0.31 NIAGMN_08610 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Escherichia coli ECRC62 0.55 BNILDI_06405 soxR redox-sensitive transcriptional activator SoxR 0.31 BNILDI_08505 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Escherichia coli ECRC98 0.55 JDDGAC_16505 soxR redox-sensitive transcriptional activator SoxR 0.31 JDDGAC_14355 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Enterobacter asburiae PDN3 0.55 EX28DRAFT_4241 redox-sensitive transcriptional activator SoxR 0.31 EX28DRAFT_3659 thiamine ABC transporter, permease protein low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_00282 Redox-sensitive transcriptional activator SoxR 0.30 MPMX20_00761 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1442 Redox-sensitive transcriptional activator SoxR 0.31 GFF173 Thiamin ABC transporter, transmembrane component low > 78
Klebsiella michiganensis M5al 0.54 BWI76_RS02000 transcriptional regulator 0.30 BWI76_RS04610 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 92
Pantoea sp. MT58 0.53 IAI47_17765 redox-sensitive transcriptional activator SoxR 0.27 IAI47_16035 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 76
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_14440 redox-sensitive transcriptional activator SoxR 0.29 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 62
Phaeobacter inhibens DSM 17395 0.50 PGA1_c03310 redox-sensitive transcriptional activator 0.25 PGA1_c34040 thiamine transport system permease protein ThiP low > 62

Not shown: 16 genomes with orthologs for Atu3915 only; 7 genomes with orthologs for Atu2713 only