Conservation of cofitness between Atu4166 and Atu0978 in Agrobacterium fabrum C58

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu4166 UDP-glucose 4-epimerase 1.0 Atu0978 two component response regulator 0.49 20
Rhizobium sp. OAE497 0.81 ABIE40_RS18880 UDP-glucose 4-epimerase GalE 0.85 ABIE40_RS05700 response regulator transcription factor low > 107
Sinorhizobium meliloti 1021 0.80 SM_b20942 UDP glucose 4-epimerase 0.81 SMc02366 transcriptional regulator low > 103
Caulobacter crescentus NA1000 0.63 CCNA_02466 UDP-glucose 4-epimerase 0.55 CCNA_02845 two-component response regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.63 CCNA_02466 UDP-glucose 4-epimerase 0.55 CCNA_02845 two-component response regulator low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.47 DVU1360 galE UDP-glucose 4-epimerase (TIGR) 0.28 DVU2588 trcR DNA-binding response regulator (TIGR) low > 55
Azospirillum sp. SherDot2 0.46 MPMX19_04151 UDP-glucose 4-epimerase 0.60 MPMX19_00794 Transcriptional activator protein CopR low > 112
Lysobacter sp. OAE881 0.39 ABIE51_RS07955 UDP-glucose 4-epimerase GalE 0.53 ABIE51_RS04165 response regulator transcription factor low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_1472 UDP-glucose 4-epimerase (EC 5.1.3.2) (from data) 0.35 Echvi_2622 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_17905 UDP-glucose 4-epimerase GalE 0.38 CA264_02615 DNA-binding response regulator low > 74
Dickeya dianthicola 67-19 0.38 HGI48_RS06635 UDP-glucose 4-epimerase GalE 0.42 HGI48_RS03485 heavy metal response regulator transcription factor low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS06990 UDP-glucose 4-epimerase GalE 0.42 DZA65_RS03595 copper/silver response regulator transcription factor SilR low > 75
Alteromonas macleodii MIT1002 0.37 MIT1002_00970 UDP-glucose 4-epimerase 0.46 MIT1002_03097 Transcriptional activator protein CopR low > 70
Bacteroides ovatus ATCC 8483 0.36 BACOVA_02242 UDP-glucose 4-epimerase 0.33 BACOVA_02385 response regulator receiver domain protein — —
Bacteroides thetaiotaomicron VPI-5482 0.36 BT0623 putative UDP-glucose 4-epimerase (NCBI ptt file) 0.33 BT0682 two-component system response regulator (NCBI ptt file) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF3323 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.45 GFF1757 response regulator in two-component regulatory system with PhoQ low > 90
Variovorax sp. SCN45 0.36 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.44 GFF2474 Two-component transcriptional response regulator SMc02366, LuxR family low > 127
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS20070 UDP-glucose 4-epimerase GalE 0.35 ABI39_RS05370 response regulator transcription factor low > 72
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS15420 UDP-glucose 4-epimerase GalE 0.38 HMPREF1078_RS01665 response regulator transcription factor — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS08705 UDP-glucose 4-epimerase GalE 0.35 ABZR88_RS15000 response regulator transcription factor low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS25430 UDP-glucose 4-epimerase GalE 0.36 CA265_RS03060 DNA-binding response regulator — —

Not shown: 31 genomes with orthologs for Atu4166 only; 16 genomes with orthologs for Atu0978 only