Conservation of cofitness between Atu0085 and Atu0331 in Agrobacterium fabrum C58

12 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0085 tRNA pseudouridine 55 synthase 1.0 Atu0331 sigma-54 modulation protein 0.24 20
Rhizobium sp. OAE497 0.83 ABIE40_RS00345 tRNA pseudouridine(55) synthase TruB 0.84 ABIE40_RS01865 ribosome-associated translation inhibitor RaiA low > 107
Sinorhizobium meliloti 1021 0.80 SMc00321 tRNA pseudouridine synthase B 0.80 SMc01140 SIGMA54 modulation protein — —
Rhodopseudomonas palustris CGA009 0.53 TX73_002255 tRNA pseudouridine(55) synthase TruB 0.41 TX73_000265 ribosome-associated translation inhibitor RaiA low > 86
Bosea sp. OAE506 0.52 ABIE41_RS04565 tRNA pseudouridine(55) synthase TruB 0.41 ABIE41_RS00120 ribosome-associated translation inhibitor RaiA low > 77
Dinoroseobacter shibae DFL-12 0.45 Dshi_3042 tRNA pseudouridine synthase B (RefSeq) 0.35 Dshi_3583 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) low > 64
Azospirillum sp. SherDot2 0.44 MPMX19_02524 tRNA pseudouridine synthase B 0.31 MPMX19_02669 Ribosome hibernation promotion factor — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c32950 tRNA pseudouridine synthase B 0.38 PGA1_c35970 putative sigma(54) modulation protein 0.30 32
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_00035 tRNA pseudouridine synthase B 0.38 CCNA_03711 ribosome-associated factor Y low > 67
Caulobacter crescentus NA1000 0.43 CCNA_00035 tRNA pseudouridine synthase B 0.38 CCNA_03711 ribosome-associated factor Y low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS13345 tRNA pseudouridine(55) synthase TruB 0.37 A4249_RS16080 ribosome-associated translation inhibitor RaiA low > 48
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_2142 tRNA pseudouridine(55) synthase 0.31 Ga0059261_2191 ribosomal subunit interface protein low > 68
Synechococcus elongatus PCC 7942 0.26 Synpcc7942_1222 truB tRNA pseudouridine synthase B 0.14 Synpcc7942_2352 lrtA sigma 54 modulation protein / SSU ribosomal protein S30P low > 38

Not shown: 70 genomes with orthologs for Atu0085 only; 1 genomes with orthologs for Atu0331 only