Conservation of cofitness between SO2155 and SO0103 in Shewanella oneidensis MR-1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2155 glyoxalase family protein (NCBI ptt file) 1.0 SO0103 fdnI formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (NCBI ptt file) 0.30 12
Shewanella sp. ANA-3 0.87 Shewana3_2315 glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq) 0.99 Shewana3_0104 formate dehydrogenase gamma subunit (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.68 Psest_0758 Lactoylglutathione lyase and related lyases 0.36 Psest_2153 formate dehydrogenase, gamma subunit low > 67
Pseudomonas segetis P6 0.66 MPMX49_02318 hypothetical protein 0.27 MPMX49_04027 Formate dehydrogenase, cytochrome b556(fdo) subunit low > 75
Rahnella sp. WP5 0.63 EX31_RS12945 VOC family protein 0.34 EX31_RS05765 formate dehydrogenase cytochrome b556 subunit low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF34 FIG01280259: hypothetical protein 0.44 GFF2558 Formate dehydrogenase N gamma subunit (EC 1.2.1.2) low > 78
Serratia liquefaciens MT49 0.60 IAI46_20160 VOC family protein 0.36 IAI46_00220 formate dehydrogenase cytochrome b556 subunit low > 87
Enterobacter asburiae PDN3 0.60 EX28DRAFT_3775 Lactoylglutathione lyase and related lyases 0.42 EX28DRAFT_1086 formate dehydrogenase, gamma subunit low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_00871 hypothetical protein 0.41 MPMX20_02376 Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit low > 85
Klebsiella michiganensis M5al 0.60 BWI76_RS05305 VOC family protein 0.41 BWI76_RS13750 formate dehydrogenase
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS13565 VOC family protein 0.38 PagCFBP13505_RS15795 formate dehydrogenase cytochrome b556 subunit low > 74
Escherichia coli ECRC102 0.58 NIAGMN_07970 yaeR VOC family protein 0.42 NIAGMN_25505 fdnI formate dehydrogenase-N subunit gamma low > 80
Escherichia fergusonii Becca 0.58 EFB2_03857 hypothetical protein 0.42 EFB2_02517 Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit low > 86
Pectobacterium carotovorum WPP14 0.58 HER17_RS16250 VOC family protein 0.44 HER17_RS14675 formate dehydrogenase-N subunit gamma low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS05200 VOC family protein 0.43 DDA3937_RS07860 formate dehydrogenase-N subunit gamma low > 74
Escherichia coli ECRC62 0.58 BNILDI_09205 yaeR VOC family protein 0.42 BNILDI_17535 fdnI formate dehydrogenase-N subunit gamma low > 75
Escherichia coli Nissle 1917 0.58 ECOLIN_RS01015 VOC family protein 0.42 ECOLIN_RS08505 formate dehydrogenase-N subunit gamma
Escherichia coli ECRC101 0.58 MCAODC_00635 yaeR VOC family protein 0.42 MCAODC_16565 fdnI formate dehydrogenase-N subunit gamma low > 87
Escherichia coli ECRC100 0.58 OKFHMN_10120 yaeR VOC family protein 0.42 OKFHMN_01375 fdnI formate dehydrogenase-N subunit gamma low > 79
Escherichia coli BW25113 0.58 b0187 yaeR orf, hypothetical protein (VIMSS) 0.42 b1476 fdnI formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) low > 76
Escherichia coli ECOR38 0.58 HEPCGN_08075 yaeR VOC family protein 0.42 HEPCGN_26410 fdnI formate dehydrogenase-N subunit gamma low > 88
Escherichia coli ECOR27 0.58 NOLOHH_02465 yaeR VOC family protein 0.42 NOLOHH_19050 fdnI formate dehydrogenase-N subunit gamma low > 76
Escherichia coli ECRC99 0.58 KEDOAH_18035 yaeR VOC family protein 0.42 KEDOAH_27065 fdnI formate dehydrogenase-N subunit gamma
Escherichia coli ECRC98 0.58 JDDGAC_13715 yaeR VOC family protein 0.42 JDDGAC_03865 fdnI formate dehydrogenase-N subunit gamma low > 87
Klebsiella pneumoniae MKP103 0.58 KDGMDA_13550 VOC family protein 0.42 KDGMDA_22790 formate dehydrogenase-N subunit gamma low > 95
Escherichia coli BL21 0.58 ECD_00185 putative lyase 0.42 ECD_01434 formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible low > 61
Dickeya dianthicola 67-19 0.58 HGI48_RS05200 VOC family protein 0.43 HGI48_RS07625 formate dehydrogenase-N subunit gamma low > 71
Dickeya dianthicola ME23 0.58 DZA65_RS05540 VOC family protein 0.42 DZA65_RS08180 formate dehydrogenase-N subunit gamma low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03476 hypothetical protein 0.42 OHPLBJKB_02241 Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit low > 74

Not shown: 19 genomes with orthologs for SO2155 only; 19 genomes with orthologs for SO0103 only