Conservation of cofitness between b3565 and b3387 in Escherichia coli BW25113

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3565 xylA xylose isomerase (NCBI) 1.0 b3387 dam DNA adenine methylase (NCBI) 0.19 6
Escherichia coli BL21 1.00 ECD_03417 D-xylose isomerase 1.00 ECD_03239 DNA adenine methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00139 Xylose isomerase 1.00 OHPLBJKB_00316 DNA adenine methylase low > 73
Escherichia fergusonii Becca 1.00 EFB2_00242 Xylose isomerase 1.00 EFB2_00441 DNA adenine methylase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20390 xylose isomerase 1.00 ECOLIN_RS19350 adenine-specific DNA-methyltransferase low > 52
Escherichia coli ECOR38 1.00 HEPCGN_14840 xylA xylose isomerase 1.00 HEPCGN_15945 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECOR27 1.00 NOLOHH_07900 xylA xylose isomerase 1.00 NOLOHH_08915 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC62 1.00 BNILDI_03645 xylA xylose isomerase 1.00 BNILDI_02605 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC101 0.99 MCAODC_06470 xylA xylose isomerase 1.00 MCAODC_07655 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC98 0.99 JDDGAC_19585 xylA xylose isomerase 1.00 JDDGAC_20755 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC102 0.99 NIAGMN_13715 xylA xylose isomerase 1.00 NIAGMN_14895 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC99 0.99 KEDOAH_12195 xylA xylose isomerase 1.00 KEDOAH_11015 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC101 0.99 OKFHMN_15955 xylA xylose isomerase 1.00 OKFHMN_17125 dam adenine-specific DNA-methyltransferase — —
Enterobacter sp. TBS_079 0.94 MPMX20_00165 Xylose isomerase 0.79 MPMX20_04276 DNA adenine methylase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF444 Xylose isomerase (EC 5.3.1.5) 0.93 GFF632 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3830 xylose isomerase 0.79 EX28DRAFT_4155 DNA adenine methylase (dam) low > 76
Klebsiella michiganensis M5al 0.93 BWI76_RS27025 Xylose isomerase (EC 5.3.1.5) (from data) 0.81 BWI76_RS26075 DNA adenine methylase low > 92
Serratia liquefaciens MT49 0.87 IAI46_00280 xylose isomerase 0.70 IAI46_23690 adenine-specific DNA-methyltransferase low > 86
Rahnella sp. WP5 0.87 EX31_RS09765 xylose isomerase 0.67 EX31_RS04710 adenine-specific DNA-methyltransferase low > 89
Dickeya dadantii 3937 0.85 DDA3937_RS20935 xylose isomerase 0.65 DDA3937_RS19535 adenine-specific DNA-methyltransferase — —
Pantoea sp. MT58 0.85 IAI47_00195 xylose isomerase 0.66 IAI47_01905 adenine-specific DNA-methyltransferase — —
Dickeya dianthicola ME23 0.85 DZA65_RS00310 xylose isomerase 0.64 DZA65_RS20750 adenine-specific DNA-methyltransferase — —
Pectobacterium carotovorum WPP14 0.85 HER17_RS21085 xylose isomerase 0.68 HER17_RS01790 adenine-specific DNA-methyltransferase — —
Dickeya dianthicola 67-19 0.84 HGI48_RS00310 xylose isomerase 0.63 HGI48_RS19665 adenine-specific DNA-methyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_03876 D-xylose isomerase 0.17 H281DRAFT_02258 DNA adenine methylase low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.51 Echvi_1876 Xylose isomerase (EC 5.3.1.5) (from data) 0.21 Echvi_1408 DNA adenine methylase (dam) low > 79
Bacteroides stercoris CC31F 0.49 HMPREF1181_RS14645 xylose isomerase 0.22 HMPREF1181_RS11040 DNA adenine methylase — —
Bacteroides ovatus ATCC 8483 0.47 BACOVA_02534 xylose isomerase 0.23 BACOVA_02878 DNA adenine methylase — —
Phocaeicola vulgatus CL09T03C04 0.46 HMPREF1058_RS06650 xylose isomerase 0.21 HMPREF1058_RS05700 Dam family site-specific DNA-(adenine-N6)-methyltransferase low > 67

Not shown: 27 genomes with orthologs for b3565 only; 12 genomes with orthologs for b3387 only