Conservation of cofitness between b2218 and b3181 in Escherichia coli BW25113

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2218 rcsC hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) 1.0 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) 0.38 15
Escherichia coli BL21 1.00 ECD_02145 hybrid sensory kinase in two-component regulatory system with RcsB and YojN 1.00 ECD_03046 transcript cleavage factor low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01492 Sensor histidine kinase RcsC 1.00 OHPLBJKB_00519 Transcription elongation factor GreA low > 73
Escherichia coli ECRC62 1.00 BNILDI_13665 rcsC two-component system sensor histidine kinase RcsC 1.00 BNILDI_01690 greA transcription elongation factor GreA — —
Escherichia coli ECOR27 1.00 NOLOHH_14745 rcsC two-component system sensor histidine kinase RcsC 1.00 NOLOHH_09845 greA transcription elongation factor GreA — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12955 two-component system sensor histidine kinase RcsC 1.00 ECOLIN_RS18320 transcription elongation factor GreA — —
Escherichia fergusonii Becca 1.00 EFB2_01637 Sensor histidine kinase RcsC 1.00 EFB2_00642 Transcription elongation factor GreA low > 86
Escherichia coli ECOR38 1.00 HEPCGN_22440 rcsC two-component system sensor histidine kinase RcsC 1.00 HEPCGN_16920 greA transcription elongation factor GreA — —
Escherichia coli ECRC101 0.99 OKFHMN_23170 rcsC two-component system sensor histidine kinase RcsC 1.00 OKFHMN_18045 greA transcription elongation factor GreA — —
Escherichia coli ECRC98 0.99 JDDGAC_27130 rcsC two-component system sensor histidine kinase RcsC 1.00 JDDGAC_21670 greA transcription elongation factor GreA — —
Escherichia coli ECRC102 0.99 NIAGMN_20935 rcsC two-component system sensor histidine kinase RcsC 1.00 NIAGMN_15805 greA transcription elongation factor GreA — —
Escherichia coli ECRC99 0.99 KEDOAH_05015 rcsC two-component system sensor histidine kinase RcsC 1.00 KEDOAH_10105 greA transcription elongation factor GreA — —
Escherichia coli ECRC101 0.99 MCAODC_14220 rcsC two-component system sensor histidine kinase RcsC 1.00 MCAODC_08565 greA transcription elongation factor GreA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF1832 Two-component sensor protein RcsC (EC 2.7.3.-) 0.98 GFF2922 Transcription elongation factor GreA low > 78
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0357 Signal transduction histidine kinase 0.97 EX28DRAFT_3232 transcription elongation factor GreA 0.45 20
Enterobacter sp. TBS_079 0.85 MPMX20_03178 Sensor histidine kinase RcsC 0.97 MPMX20_04085 Transcription elongation factor GreA low > 85
Klebsiella michiganensis M5al 0.81 BWI76_RS19920 hybrid sensor histidine kinase/response regulator 0.97 BWI76_RS25160 transcription elongation factor GreA low > 92
Erwinia tracheiphila SCR3 0.64 LU632_RS08170 rcsC two-component system sensor histidine kinase RcsC 0.79 LU632_RS21165 greA transcription elongation factor GreA low > 74
Pantoea sp. MT58 0.64 IAI47_06470 two-component system sensor histidine kinase RcsC 0.86 IAI47_17080 transcription elongation factor GreA low > 76
Serratia liquefaciens MT49 0.62 IAI46_17455 two-component system sensor histidine kinase RcsC 0.89 IAI46_01880 transcription elongation factor GreA low > 86
Rahnella sp. WP5 0.61 EX31_RS19285 two-component system sensor histidine kinase RcsC 0.90 EX31_RS08595 transcription elongation factor GreA low > 89
Pectobacterium carotovorum WPP14 0.58 HER17_RS15580 two-component system sensor histidine kinase RcsC 0.92 HER17_RS18330 transcription elongation factor GreA — —
Dickeya dadantii 3937 0.57 DDA3937_RS05890 two-component system sensor histidine kinase RcsC 0.90 DDA3937_RS03015 transcription elongation factor GreA — —
Dickeya dianthicola 67-19 0.56 HGI48_RS05935 two-component system sensor histidine kinase RcsC 0.90 HGI48_RS03185 transcription elongation factor GreA low > 71
Dickeya dianthicola ME23 0.56 DZA65_RS06270 two-component system sensor histidine kinase RcsC 0.90 DZA65_RS03180 transcription elongation factor GreA 0.47 19
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_18205 histidine kinase 0.59 AO353_05625 transcription elongation factor GreA 0.37 67
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS07890 response regulator 0.59 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS07890 response regulator 0.59 PFLU_RS25875 transcription elongation factor GreA low > 109

Not shown: 0 genomes with orthologs for b2218 only; 70 genomes with orthologs for b3181 only