Conservation of cofitness between b1184 and b2184 in Escherichia coli BW25113

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1184 umuC DNA polymerase V subunit UmuC (NCBI) 1.0 b2184 yejH DNA damage response helicase (yejH or radD) (from data) 0.42 12
Escherichia coli ECOR27 1.00 NOLOHH_20750 umuC DNA polymerase V catalytic protein 0.99 NOLOHH_14930 radD Putative DNA repair helicase RadD — —
Escherichia coli BL21 1.00 ECD_01159 translesion error-prone DNA polymerase V subunit; DNA polymerase activity 1.00 ECD_02114 putative ATP-dependent DNA or RNA helicase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02505 Protein UmuC 1.00 OHPLBJKB_01525 Putative DNA repair helicase RadD low > 73
Escherichia coli ECRC62 0.99 BNILDI_18915 umuC DNA polymerase V catalytic protein 0.99 BNILDI_13850 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC99 0.99 KEDOAH_25280 umuC DNA polymerase V catalytic protein 1.00 KEDOAH_04830 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC102 0.99 NIAGMN_27955 umuC DNA polymerase V catalytic protein 1.00 NIAGMN_21120 radD Putative DNA repair helicase RadD — —
Escherichia coli ECOR38 0.99 HEPCGN_24725 umuC DNA polymerase V catalytic protein 1.00 HEPCGN_22620 radD Putative DNA repair helicase RadD low > 85
Escherichia coli ECRC101 0.99 OKFHMN_28265 umuC DNA polymerase V catalytic protein 1.00 OKFHMN_23355 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC98 0.99 JDDGAC_06245 umuC DNA polymerase V catalytic protein 1.00 JDDGAC_27315 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC101 0.99 MCAODC_21905 umuC DNA polymerase V catalytic protein 1.00 MCAODC_14405 radD Putative DNA repair helicase RadD — —
Escherichia fergusonii Becca 0.98 EFB2_02748 Protein UmuC 0.99 EFB2_01672 Putative DNA repair helicase RadD low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS07160 DNA polymerase V catalytic protein 0.99 ECOLIN_RS12765 DEAD/DEAH box helicase — —
Klebsiella michiganensis M5al 0.87 BWI76_RS12385 DNA polymerase V subunit UmuC 0.92 BWI76_RS19815 ATP-dependent helicase low > 92
Enterobacter asburiae PDN3 0.87 EX28DRAFT_1261 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.92 EX28DRAFT_0377 DNA or RNA helicases of superfamily II 0.51 28
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3989 Error-prone, lesion bypass DNA polymerase V (UmuC) 0.96 GFF3752 ATP-dependent RNA helicase YejH low > 78
Rahnella sp. WP5 0.68 EX31_RS00805 translesion error-prone DNA polymerase V subunit UmuC 0.81 EX31_RS19200 DEAD/DEAH box helicase low > 89
Enterobacter sp. TBS_079 0.66 MPMX20_02045 Protein UmuC 0.92 MPMX20_03150 Putative DNA repair helicase RadD low > 85
Serratia liquefaciens MT49 0.65 IAI46_15980 translesion error-prone DNA polymerase V subunit UmuC 0.82 IAI46_17350 DEAD/DEAH box helicase family protein low > 86
Pantoea sp. MT58 0.64 IAI47_10585 translesion error-prone DNA polymerase V subunit UmuC 0.83 IAI47_06580 DEAD/DEAH box helicase low > 76
Erwinia tracheiphila SCR3 0.56 LU632_RS01730 umuC translesion error-prone DNA polymerase V subunit UmuC 0.79 LU632_RS17600 DEAD/DEAH box helicase low > 74
Shewanella sp. ANA-3 0.36 Shewana3_1832 DNA-repair protein (RefSeq) 0.53 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SOA0012 umuC umuC protein (NCBI ptt file) 0.53 SO2744 DNA damage response helicase (yejH or radD) (from data) low > 76

Not shown: 15 genomes with orthologs for b1184 only; 8 genomes with orthologs for b2184 only