Conservation of cofitness between b2290 and b1285 in Escherichia coli BW25113

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2290 yfbQ aspartate aminotransferase (NCBI) 1.0 b1285 gmr modulator of Rnase II stability (NCBI) 0.68 3
Escherichia fergusonii Becca 1.00 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA 0.98 EFB2_02639 Cyclic di-GMP phosphodiesterase PdeR low > 86
Escherichia coli ECOR38 1.00 HEPCGN_22030 alaA alanine transaminase AlaA 0.99 HEPCGN_25675 pdeR cyclic di-GMP phosphodiesterase low > 85
Escherichia coli BL21 1.00 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase 0.99 ECD_01262 cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA 0.99 OHPLBJKB_02396 Cyclic di-GMP phosphodiesterase PdeR low > 73
Escherichia coli ECRC62 1.00 BNILDI_13365 alaA alanine transaminase AlaA 0.99 BNILDI_18340 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia coli ECOR27 1.00 NOLOHH_14445 alaA alanine transaminase AlaA 1.00 NOLOHH_20190 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS13295 alanine transaminase AlaA 0.98 ECOLIN_RS07755 cyclic di-GMP phosphodiesterase low > 52
Escherichia coli ECRC99 1.00 KEDOAH_05370 alaA alanine transaminase AlaA 0.99 KEDOAH_26240 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia coli ECRC101 1.00 OKFHMN_22825 alaA alanine transaminase AlaA 0.99 OKFHMN_02525 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia coli ECRC98 1.00 JDDGAC_26790 alaA alanine transaminase AlaA 0.99 JDDGAC_05070 pdeR cyclic di-GMP phosphodiesterase — —
Escherichia coli ECRC102 1.00 NIAGMN_20595 alaA alanine transaminase AlaA 0.99 NIAGMN_26695 pdeR cyclic di-GMP phosphodiesterase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) 0.80 GFF2699 FIG00637999: hypothetical protein low > 78
Enterobacter asburiae PDN3 0.97 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase 0.80 EX28DRAFT_0960 PAS domain S-box/diguanylate cyclase (GGDEF) domain low > 76
Enterobacter sp. TBS_079 0.96 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA 0.80 MPMX20_02488 Cyclic di-GMP phosphodiesterase PdeR low > 85
Pantoea sp. MT58 0.93 IAI47_06350 pyridoxal phosphate-dependent aminotransferase 0.69 IAI47_09305 cyclic di-GMP phosphodiesterase low > 76
Serratia liquefaciens MT49 0.91 IAI46_17720 pyridoxal phosphate-dependent aminotransferase 0.63 IAI46_24280 cyclic di-GMP phosphodiesterase low > 86
Rahnella sp. WP5 0.88 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase 0.58 EX31_RS08335 cyclic di-GMP phosphodiesterase low > 89
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS08950 aminotransferase 0.51 BPHYT_RS27100 RNase II stability modulator low > 109
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase 0.54 QEN71_RS10895 cyclic di-GMP phosphodiesterase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_00809 alanine-synthesizing transaminase 0.52 H281DRAFT_02926 diguanylate cyclase/phosphodiesterase low > 103
Paraburkholderia graminis OAS925 0.65 ABIE53_002025 alanine-synthesizing transaminase 0.52 ABIE53_005863 cyclic di-GMP phosphodiesterase Gmr low > 113

Not shown: 61 genomes with orthologs for b2290 only; 0 genomes with orthologs for b1285 only