Conservation of cofitness between b3115 and b1124 in Escherichia coli BW25113

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3115 tdcD propionate kinase/acetate kinase C, anaerobic (RefSeq) 1.0 b1124 potC spermidine/putrescine ABC transporter membrane protein (NCBI) 0.38 8
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00585 Propionate kinase 1.00 OHPLBJKB_02544 Inner membrane ABC transporter permease protein YdcV low > 73
Escherichia coli ECOR38 1.00 HEPCGN_17245 tdcD propionate kinase 1.00 HEPCGN_24065 potC spermidine/putrescine ABC transporter permease PotC low > 85
Escherichia coli BL21 1.00 ECD_02982 propionate kinase/acetate kinase C, anaerobic 1.00 ECD_01122 spermidine/putrescine ABC transporter permease low > 60
Escherichia coli ECRC62 1.00 BNILDI_01335 tdcD propionate kinase 1.00 BNILDI_19110 potC spermidine/putrescine ABC transporter permease PotC — —
Escherichia coli ECOR27 1.00 NOLOHH_10190 tdcD propionate kinase 1.00 NOLOHH_20945 potC spermidine/putrescine ABC transporter permease PotC — —
Escherichia coli ECRC98 0.99 JDDGAC_22045 tdcD propionate kinase 1.00 JDDGAC_07090 potC spermidine/putrescine ABC transporter permease PotC — —
Escherichia coli ECRC101 0.99 MCAODC_08925 tdcD propionate kinase 1.00 MCAODC_22790 potC spermidine/putrescine ABC transporter permease PotC — —
Escherichia coli ECRC101 0.99 OKFHMN_18410 tdcD propionate kinase 1.00 OKFHMN_03430 potC spermidine/putrescine ABC transporter permease PotC — —
Escherichia coli ECRC102 0.99 NIAGMN_16175 tdcD propionate kinase 1.00 NIAGMN_24400 potC spermidine/putrescine ABC transporter permease PotC — —
Escherichia coli ECRC99 0.99 KEDOAH_09735 tdcD propionate kinase 1.00 KEDOAH_24325 potC spermidine/putrescine ABC transporter permease PotC — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17930 propionate kinase 1.00 ECOLIN_RS06475 spermidine/putrescine ABC transporter permease PotC — —
Escherichia fergusonii Becca 0.99 EFB2_00699 Propionate kinase 1.00 EFB2_02851 Inner membrane ABC transporter permease protein YdcV low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3208 Acetate kinase (EC 2.7.2.1) 0.87 GFF3405 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) low > 78
Enterobacter sp. TBS_079 0.80 MPMX20_04019 Propionate kinase 0.90 MPMX20_01805 Inner membrane ABC transporter permease protein YdcV low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3176 acetate kinase 0.94 EX28DRAFT_1806 ABC-type spermidine/putrescine transport system, permease component II low > 76
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS08510 acetate kinase 0.30 HMPREF1058_RS03230 ABC transporter permease — —
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS04945 acetate kinase 0.31 HMPREF1078_RS08110 ABC transporter permease — —
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS02735 acetate kinase 0.30 ABI39_RS17810 ABC transporter permease — —
Fusobacterium nucleatum SB010 0.40 HUW76_06475 acetate kinase 0.37 HUW76_00740 ABC transporter permease — —
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS03200 acetate kinase 0.32 HMPREF1181_RS12430 ABC transporter permease — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT3693 acetate kinase (NCBI ptt file) 0.30 BT1289 putrescine transport system permease protein potI (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.39 BACOVA_03500 acetate kinase 0.28 BACOVA_00084 ABC transporter, permease protein — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_0632 acetate kinase (RefSeq) 0.23 Dshi_1598 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 64
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS01305 acetate kinase 0.25 HSERO_RS05400 polyamine ABC transporter permease low > 78
Variovorax sp. SCN45 0.27 GFF3161 Acetate kinase (EC 2.7.2.1) 0.25 GFF5033 ABC-type spermidine/putrescine transport system, permease component II — —

Not shown: 22 genomes with orthologs for b3115 only; 12 genomes with orthologs for b1124 only