Conservation of cofitness between b0678 and b0113 in Escherichia coli BW25113

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0678 nagB glucosamine-6-phosphate deaminase (NCBI) 1.0 b0113 pdhR transcriptional regulator of pyruvate dehydrogenase complex (NCBI) 0.30 18
Escherichia coli ECRC102 1.00 NIAGMN_05215 nagB glucosamine-6-phosphate deaminase 1.00 NIAGMN_08360 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia coli ECRC101 1.00 MCAODC_26375 nagB glucosamine-6-phosphate deaminase 1.00 MCAODC_01025 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03037 Glucosamine-6-phosphate deaminase 1.00 OHPLBJKB_03548 Pyruvate dehydrogenase complex repressor low > 73
Escherichia coli ECRC98 1.00 JDDGAC_10810 nagB glucosamine-6-phosphate deaminase 1.00 JDDGAC_14105 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia coli ECRC62 1.00 BNILDI_21545 nagB glucosamine-6-phosphate deaminase 1.00 BNILDI_08755 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia coli ECOR38 1.00 HEPCGN_01070 nagB glucosamine-6-phosphate deaminase 1.00 HEPCGN_08490 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 85
Escherichia coli ECRC99 1.00 KEDOAH_20810 nagB glucosamine-6-phosphate deaminase 1.00 KEDOAH_17645 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia coli ECOR27 1.00 NOLOHH_23540 nagB glucosamine-6-phosphate deaminase 1.00 NOLOHH_02855 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 57
Escherichia coli ECRC101 1.00 OKFHMN_07160 nagB glucosamine-6-phosphate deaminase 1.00 OKFHMN_10510 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia coli BL21 1.00 ECD_00635 glucosamine-6-phosphate deaminase 1.00 ECD_00112 pyruvate dehydrogenase complex repressor; autorepressor low > 60
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03620 glucosamine-6-phosphate deaminase 1.00 ECOLIN_RS00635 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 52
Escherichia fergusonii Becca 0.99 EFB2_03425 Glucosamine-6-phosphate deaminase 1.00 EFB2_03932 Pyruvate dehydrogenase complex repressor low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4586 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) 0.92 GFF123 Transcriptional repressor for pyruvate dehydrogenase complex low > 78
Klebsiella michiganensis M5al 0.95 BWI76_RS08215 glucosamine-6-phosphate deaminase 0.88 BWI76_RS04875 transcriptional regulator PdhR low > 92
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2297 glucosamine-6-phosphate isomerase 0.90 EX28DRAFT_3708 Transcriptional regulators low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_01324 Glucosamine-6-phosphate deaminase 0.91 MPMX20_00806 Pyruvate dehydrogenase complex repressor low > 85
Pantoea sp. MT58 0.87 IAI47_13880 glucosamine-6-phosphate deaminase 0.78 IAI47_15815 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 76
Rahnella sp. WP5 0.86 EX31_RS23265 glucosamine-6-phosphate deaminase 0.84 EX31_RS03485 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS16245 nagB glucosamine-6-phosphate deaminase 0.75 LU632_RS03075 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Serratia liquefaciens MT49 0.84 IAI46_06090 glucosamine-6-phosphate deaminase 0.87 IAI46_21330 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS15105 glucosamine-6-phosphate deaminase 0.79 HER17_RS03285 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_19215 glucosamine-6-phosphate deaminase 0.66 CSW01_12225 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 62
Dickeya dadantii 3937 0.81 DDA3937_RS06310 glucosamine-6-phosphate deaminase 0.79 DDA3937_RS17930 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS06355 glucosamine-6-phosphate deaminase 0.79 HGI48_RS17855 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS06700 glucosamine-6-phosphate deaminase 0.79 DZA65_RS19005 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Shewanella loihica PV-4 0.38 Shew_0815 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (from data) 0.57 Shew_3432 pdhR transcriptional regulator PdhR (RefSeq) low > 60
Magnetospirillum magneticum AMB-1 0.28 AMB_RS13750 glucosamine-6-phosphate deaminase 0.40 AMB_RS01210 FCD domain-containing protein — —

Not shown: 10 genomes with orthologs for b0678 only; 29 genomes with orthologs for b0113 only