Conservation of cofitness between Rru_A0706 and Rru_A0916 in Rhodospirillum rubrum S1H

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A0706 RarD protein (NCBI) 1.0 Rru_A0916 pyruvate-formate lyase-activating enzyme (NCBI) 0.56 9
Serratia liquefaciens MT49 0.35 IAI46_00755 EamA family transporter RarD 0.30 IAI46_13885 glycyl-radical enzyme activating protein low > 86
Pectobacterium carotovorum WPP14 0.35 HER17_RS01380 EamA family transporter RarD 0.34 HER17_RS03410 choline TMA-lyase-activating enzyme low > 75
Rahnella sp. WP5 0.34 EX31_RS15195 EamA family transporter RarD 0.30 EX31_RS09825 glycyl-radical enzyme activating protein low > 89
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU2425 rarD rarD protein (TIGR) 0.38 DVU2825 pyruvate formate-lyase 1 activating enzyme, putative (TIGR) low > 55
Enterobacter asburiae PDN3 0.34 EX28DRAFT_4484 rarD protein 0.33 EX28DRAFT_2140 glycyl-radical enzyme activating protein low > 76
Shewanella oneidensis MR-1 0.34 SO4243 rarD rarD protein (NCBI ptt file) 0.18 SO2408 radical activating enzyme (NCBI ptt file) low > 76
Escherichia coli ECRC62 0.33 BNILDI_05025 rarD EamA family transporter RarD 0.28 BNILDI_05765 pflC [formate-C-acetyltransferase]-activating enzyme low > 75
Escherichia coli BW25113 0.33 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.28 b3952 pflC probable pyruvate formate lyase activating enzyme 2 (VIMSS) low > 76
Escherichia coli Nissle 1917 0.33 ECOLIN_RS21920 EamA family transporter RarD 0.28 ECOLIN_RS22815 [formate-C-acetyltransferase]-activating enzyme low > 55
Escherichia coli BL21 0.33 ECD_03698 putative chloramphenical resistance permease 0.27 ECD_03837 putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme low > 61
Enterobacter sp. TBS_079 0.33 MPMX20_04461 Protein RarD 0.33 MPMX20_01464 Choline trimethylamine-lyase activating enzyme low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_04232 Protein RarD 0.27 OHPLBJKB_04098 Benzylsuccinate synthase activating enzyme low > 73
Escherichia fergusonii Becca 0.33 EFB2_04818 Protein RarD 0.29 EFB2_04188 Choline trimethylamine-lyase activating enzyme low > 86
Escherichia coli ECOR27 0.33 NOLOHH_06505 rarD EamA family transporter RarD 0.28 NOLOHH_05760 pflC [formate-C-acetyltransferase]-activating enzyme low > 75
Escherichia coli ECOR38 0.33 HEPCGN_13075 rarD EamA family transporter RarD 0.29 HEPCGN_14175 cutD choline TMA-lyase-activating enzyme low > 87
Escherichia coli ECRC102 0.33 NIAGMN_12130 rarD EamA family transporter RarD 0.27 NIAGMN_11365 pflC [formate-C-acetyltransferase]-activating enzyme — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF245 Protein rarD 0.29 GFF723 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) low > 78
Escherichia coli ECRC100 0.33 OKFHMN_14375 rarD EamA family transporter RarD 0.27 OKFHMN_13615 pflC [formate-C-acetyltransferase]-activating enzyme low > 80
Escherichia coli ECRC99 0.33 KEDOAH_13775 rarD EamA family transporter RarD 0.27 KEDOAH_14545 pflC [formate-C-acetyltransferase]-activating enzyme — —
Escherichia coli ECRC98 0.33 JDDGAC_18000 rarD EamA family transporter RarD 0.27 JDDGAC_17240 pflC [formate-C-acetyltransferase]-activating enzyme low > 86
Escherichia coli ECRC101 0.32 MCAODC_04880 rarD EamA family transporter RarD 0.27 MCAODC_04115 pflC [formate-C-acetyltransferase]-activating enzyme low > 87
Klebsiella michiganensis M5al 0.32 BWI76_RS01230 chloramphenicol resistance permease RarD 0.34 BWI76_RS09075 pyruvate formate lyase-activating protein low > 92

Not shown: 54 genomes with orthologs for Rru_A0706 only; 4 genomes with orthologs for Rru_A0916 only