Homologs of Echvi_4324 from Echinicola vietnamensis KMM 6221, DSM 17526

RNA polymerase sigma-70 factor, Bacteroides expansion family 1

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4324 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 100 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4566 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 51 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1926 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 35 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 38 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20645 RNA polymerase subunit sigma-70 insig. 34 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21040 RNA polymerase sigma-70 factor insig. 36 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06675 hypothetical protein insig. 33 95
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2168 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 34 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03205 RNA polymerase sigma factor no data 29 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 31 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 31 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12470 hypothetical protein insig. 34 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00850 hypothetical protein insig. 32 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15195 RNA polymerase sigma-70 factor insig. 36 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 33 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3125 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 32 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10380 RNA polymerase subunit sigma-70 insig. 34 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02700 RNA polymerase sigma-70 factor insig. 25 99
  Bacteroides ovatus ATCC 8483 BACOVA_02117 RNA polymerase sigma-70 factor insig. 32 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4327 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 31 91
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 28 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3981 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 32 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06645 RNA polymerase sigma-70 factor insig. 29 95
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18610 RNA polymerase sigma-70 factor insig. 31 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2584 RNA polymerase sigma factor, sigma-70 family insig. 29 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 30 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13325 RNA polymerase sigma-70 factor insig. 35 82
  Bacteroides thetaiotaomicron VPI-5482 BT1617 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 89
  Bacteroides ovatus ATCC 8483 BACOVA_00842 RNA polymerase sigma-70 factor insig. 30 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12140 hypothetical protein insig. 25 97
  Shewanella loihica PV-4 Shew_2956 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 31 90
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 29 91
  Bacteroides stercoris CC31F HMPREF1181_RS06050 RNA polymerase sigma-70 factor insig. 30 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07365 RNA polymerase sigma factor insig. 34 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 29 93
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09110 RNA polymerase sigma-70 factor sig. 30 91
  Bacteroides ovatus ATCC 8483 BACOVA_05457 RNA polymerase sigma-70 factor insig. 31 89
  Bacteroides thetaiotaomicron VPI-5482 BT2198 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 83
  Bacteroides ovatus ATCC 8483 BACOVA_00923 RNA polymerase sigma-70 factor insig. 28 94
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17775 hypothetical protein sig. 32 90
  Bacteroides thetaiotaomicron VPI-5482 BT3010 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12860 RNA polymerase sigma-70 factor cofit 34 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09605 RNA polymerase sigma-70 factor insig. 31 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 30 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00265 RNA polymerase sigma-70 factor insig. 29 89
  Bacteroides thetaiotaomicron VPI-5482 BT3993 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 31 83
  Bacteroides ovatus ATCC 8483 BACOVA_04812 RNA polymerase sigma-70 factor insig. 31 90
  Bacteroides stercoris CC31F HMPREF1181_RS01060 RNA polymerase sigma-70 factor insig. 26 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05690 RNA polymerase sigma-70 factor insig. 30 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 28 96
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 27 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03570 RNA polymerase sigma-70 factor insig. 30 91
  Cellulophaga baltica 18 M666_RS01775 RNA polymerase sigma-70 factor insig. 31 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05735 RNA polymerase sigma-70 factor insig. 30 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05370 RNA polymerase subunit sigma-70 insig. 28 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14245 RNA polymerase sigma-70 factor insig. 34 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 28 92
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 27 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14155 RNA polymerase sigma-70 factor insig. 32 84
  Phocaeicola dorei CL03T12C01 ABI39_RS01635 RNA polymerase sigma-70 factor insig. 30 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 31 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02575 hypothetical protein insig. 30 89
  Bacteroides thetaiotaomicron VPI-5482 BT3277 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 30 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12340 RNA polymerase sigma-70 factor cofit 33 81
  Phocaeicola dorei CL03T12C01 ABI39_RS10155 RNA polymerase sigma-70 factor insig. 30 93
  Phocaeicola dorei CL03T12C01 ABI39_RS03325 RNA polymerase sigma-70 factor insig. 31 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09005 RNA polymerase sigma-70 factor sig. 31 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3485 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 31 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00770 RNA polymerase sigma-70 factor sig. 30 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14710 hypothetical protein insig. 30 86
  Bacteroides ovatus ATCC 8483 BACOVA_03129 Sigma-70 region 2 insig. 29 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3656 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23360 hypothetical protein insig. 28 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12900 RNA polymerase sigma factor insig. 28 91
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02095 RNA polymerase sigma factor insig. 28 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02390 RNA polymerase sigma-70 factor sig. 29 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08220 RNA polymerase sigma-70 factor insig. 28 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05630 RNA polymerase sigma-70 factor sig. 29 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07030 RNA polymerase sigma-70 factor insig. 29 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02810 RNA polymerase sigma-70 factor strong 27 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13360 RNA polymerase sigma-70 factor insig. 30 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11895 hypothetical protein insig. 31 90
  Bacteroides ovatus ATCC 8483 BACOVA_04151 RNA polymerase sigma-70 factor strong 33 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00160 hypothetical protein insig. 29 99
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 26 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05010 RNA polymerase sigma-70 factor insig. 28 92
  Phocaeicola dorei CL03T12C01 ABI39_RS02605 RNA polymerase sigma-70 factor insig. 28 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 32 87
  Bacteroides ovatus ATCC 8483 BACOVA_05184 RNA polymerase sigma-70 factor insig. 29 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06740 hypothetical protein insig. 34 73
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 33 85
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15190 RNA polymerase sigma-70 factor insig. 29 89
  Bacteroides ovatus ATCC 8483 BACOVA_00098 RNA polymerase sigma-70 factor insig. 29 93
  Bacteroides thetaiotaomicron VPI-5482 BT3269 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 30 93
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 25 93
  Bacteroides thetaiotaomicron VPI-5482 BT2169 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 31 91
  Bacteroides thetaiotaomicron VPI-5482 BT4643 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02650 RNA polymerase sigma factor insig. 26 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06675 RNA polymerase sigma-70 factor insig. 33 88