Homologs of DZA65_RS08735 from Dickeya dianthicola ME23

helix-turn-helix domain-containing protein
SEED: Right origin-binding protein
KEGG: right origin-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola ME23 DZA65_RS08735 helix-turn-helix domain-containing protein insig. 100 100
o Dickeya dianthicola 67-19 HGI48_RS08140 helix-turn-helix domain-containing protein cofit 97 100
o Dickeya dadantii 3937 DDA3937_RS07320 helix-turn-helix domain-containing protein insig. 89 100
  Dickeya dianthicola ME23 DZA65_RS19505 MDR efflux pump AcrAB transcriptional activator RobA sig. 36 95
  Dickeya dianthicola 67-19 HGI48_RS18365 MDR efflux pump AcrAB transcriptional activator RobA cofit 36 95
  Dickeya dadantii 3937 DDA3937_RS18435 MDR efflux pump AcrAB transcriptional activator RobA insig. 35 95
  Pectobacterium carotovorum WPP14 HER17_RS02770 MDR efflux pump AcrAB transcriptional activator RobA insig. 36 94
  Serratia liquefaciens MT49 IAI46_03005 MDR efflux pump AcrAB transcriptional activator RobA insig. 36 95
  Pantoea sp. MT58 IAI47_16240 MDR efflux pump AcrAB transcriptional activator RobA sig. 35 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21865 MDR efflux pump AcrAB transcriptional activator RobA cofit 36 95
  Rahnella sp. WP5 EX31_RS03965 MDR efflux pump AcrAB transcriptional activator RobA insig. 34 95
  Klebsiella pneumoniae MKP103 KDGMDA_12470 MDR efflux pump AcrAB transcriptional activator RobA insig. 34 95
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06315 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 35 94
  Erwinia tracheiphila SCR3 LU632_RS02595 robA MDR efflux pump AcrAB transcriptional activator RobA sig. 35 94
  Erwinia amylovora T8 OLJFJH_01510 MDR efflux pump AcrAB transcriptional activator RobA sig. 34 95
  Serratia liquefaciens MT49 IAI46_02595 helix-turn-helix domain-containing protein insig. 35 95
  Klebsiella michiganensis M5al BWI76_RS04205 right oriC-binding transcriptional activator sig. 33 95
  Enterobacter asburiae PDN3 EX28DRAFT_3606 AraC-type DNA-binding domain-containing proteins insig. 32 95
  Enterobacter sp. TBS_079 MPMX20_00703 Right origin-binding protein sig. 32 95
  Escherichia coli BL21 ECD_04272 right oriC-binding transcriptional activator, AraC family insig. 33 95
  Escherichia coli ECOR27 NOLOHH_03480 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 33 95
  Escherichia coli ECOR38 HEPCGN_09155 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 33 95
  Escherichia coli ECRC100 OKFHMN_11150 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 33 95
  Escherichia coli ECRC101 MCAODC_01665 robA MDR efflux pump AcrAB transcriptional activator RobA strong 33 95
  Escherichia coli ECRC102 NIAGMN_09000 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 33 95
  Escherichia coli ECRC62 BNILDI_08120 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 33 95
  Escherichia coli ECRC98 JDDGAC_14745 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 33 95
  Escherichia coli ECRC99 KEDOAH_17005 robA MDR efflux pump AcrAB transcriptional activator RobA no data 33 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03665 Right origin-binding protein insig. 33 95
  Escherichia coli Nissle 1917 ECOLIN_RS25230 MDR efflux pump AcrAB transcriptional activator RobA insig. 33 95
  Escherichia coli BW25113 b4396 rob DNA-binding transcriptional activator (NCBI) strong 33 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1064 Right origin-binding protein insig. 35 86
  Escherichia fergusonii Becca EFB2_04048 Right origin-binding protein insig. 33 95
  Rahnella sp. WP5 EX31_RS01820 helix-turn-helix domain-containing protein insig. 33 95
  Serratia liquefaciens MT49 IAI46_21365 helix-turn-helix domain-containing protein insig. 36 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2667 Right origin-binding protein strong 33 92
  Serratia liquefaciens MT49 IAI46_07760 helix-turn-helix domain-containing protein insig. 57 36
  Escherichia coli ECOR38 HEPCGN_10855 araC AraC-type DNA-binding domain and AraC-containing proteins strong 54 35
  Escherichia coli ECRC62 BNILDI_09390 araC AraC-type DNA-binding domain and AraC-containing proteins cofit 54 35
  Serratia liquefaciens MT49 IAI46_11475 helix-turn-helix domain-containing protein insig. 32 92
  Escherichia coli Nissle 1917 ECOLIN_RS01970 helix-turn-helix domain-containing protein no data 29 95
  Escherichia coli ECRC62 BNILDI_00070 glxA AraC family transcriptional regulator insig. 32 86
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03381 Right origin-binding protein insig. 32 86
  Escherichia fergusonii Becca EFB2_03739 Right origin-binding protein insig. 29 95
  Escherichia coli ECOR27 NOLOHH_01945 glxA AraC family transcriptional regulator insig. 32 86
  Escherichia coli ECOR38 HEPCGN_07655 glxA AraC family transcriptional regulator insig. 32 86
  Escherichia coli BL21 ECD_00257 putative DNA-binding transcriptional regulator insig. 32 86
  Escherichia coli ECRC100 OKFHMN_09130 glxA AraC family transcriptional regulator cofit 32 86
  Escherichia coli ECRC101 MCAODC_28355 glxA AraC family transcriptional regulator insig. 32 86
  Escherichia coli ECRC98 JDDGAC_12780 glxA AraC family transcriptional regulator insig. 32 86
  Escherichia coli ECRC99 KEDOAH_18835 glxA AraC family transcriptional regulator no data 32 86
  Escherichia coli ECRC102 NIAGMN_07195 glxA AraC family transcriptional regulator insig. 32 86
  Erwinia amylovora T8 OLJFJH_14040 AraC family transcriptional regulator insig. 52 34
  Pantoea sp. MT58 IAI47_03485 helix-turn-helix domain-containing protein insig. 32 88
  Pectobacterium carotovorum WPP14 HER17_RS07425 helix-turn-helix domain-containing protein insig. 56 33
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16220 helix-turn-helix domain-containing protein cofit 31 94
  Klebsiella michiganensis M5al BWI76_RS15295 MDR efflux pump AcrAB transcriptional activator MarA strong 58 32
  Klebsiella pneumoniae MKP103 KDGMDA_21500 multiple antibiotic resistance transcriptional regulator MarR insig. 58 32
  Serratia liquefaciens MT49 IAI46_09935 helix-turn-helix domain-containing protein insig. 49 38
  Enterobacter asburiae PDN3 EX28DRAFT_1206 Helix-turn-helix domain insig. 58 32
  Enterobacter sp. TBS_079 MPMX20_02259 Multiple antibiotic resistance protein MarA insig. 58 32
  Escherichia coli BL21 ECD_01490 multiple antibiotic resistance transcriptional regulator no data 57 32
  Escherichia fergusonii Becca EFB2_02430 Multiple antibiotic resistance protein MarA insig. 57 32
  Escherichia coli ECOR27 NOLOHH_18720 marA MDR efflux pump AcrAB transcriptional activator MarA insig. 57 32
  Escherichia coli ECOR38 HEPCGN_26845 marA MDR efflux pump AcrAB transcriptional activator MarA insig. 57 32
  Escherichia coli ECRC100 OKFHMN_01075 marA MDR efflux pump AcrAB transcriptional activator MarA no data 57 32
  Escherichia coli ECRC101 MCAODC_16850 marA MDR efflux pump AcrAB transcriptional activator MarA insig. 57 32
  Escherichia coli ECRC102 NIAGMN_25220 marA MDR efflux pump AcrAB transcriptional activator MarA no data 57 32
  Escherichia coli ECRC62 BNILDI_17210 marA MDR efflux pump AcrAB transcriptional activator MarA cofit 57 32
  Escherichia coli ECRC98 JDDGAC_03585 marA MDR efflux pump AcrAB transcriptional activator MarA no data 57 32
  Escherichia coli ECRC99 KEDOAH_27355 marA MDR efflux pump AcrAB transcriptional activator MarA no data 57 32
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02188 Multiple antibiotic resistance protein MarA insig. 57 32
  Escherichia coli Nissle 1917 ECOLIN_RS08735 MDR efflux pump AcrAB transcriptional activator MarA insig. 57 32
  Escherichia coli BW25113 b1531 marA multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) strong 57 32
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2506 Multiple antibiotic resistance protein MarA insig. 57 32
  Pantoea sp. MT58 IAI47_17600 helix-turn-helix domain-containing protein insig. 50 34
  Klebsiella pneumoniae MKP103 KDGMDA_02520 AraC family transcriptional regulator insig. 53 33
  Klebsiella michiganensis M5al BWI76_RS12945 AraC family transcriptional regulator no data 50 34
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09690 helix-turn-helix domain-containing protein cofit 49 34
  Pantoea sp. MT58 IAI47_10300 helix-turn-helix domain-containing protein insig. 50 33
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05835 helix-turn-helix domain-containing protein insig. 50 33
  Enterobacter sp. TBS_079 MPMX20_01153 HTH-type transcriptional activator RhaS insig. 51 34
  Erwinia amylovora T8 OLJFJH_03390 superoxide response transcriptional regulator SoxS insig. 43 37
  Klebsiella michiganensis M5al BWI76_RS07475 DNA-binding transcriptional regulator RamA strong 51 32
  Klebsiella pneumoniae MKP103 KDGMDA_15835 RamA family antibiotic efflux transcriptional regulator strong 51 32
  Enterobacter asburiae PDN3 EX28DRAFT_1474 AraC-type DNA-binding domain-containing proteins insig. 48 34
  Serratia liquefaciens MT49 IAI46_18640 helix-turn-helix domain-containing protein insig. 44 39
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4485 Transcriptional activator RamA insig. 50 32
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_10750 AraC family transcriptional regulator no data 51 33
  Erwinia tracheiphila SCR3 LU632_RS00855 helix-turn-helix domain-containing protein insig. 51 33
  Rahnella sp. WP5 EX31_RS01485 helix-turn-helix domain-containing protein insig. 49 34
  Klebsiella michiganensis M5al BWI76_RS10310 DNA-binding transcriptional regulator RamA sig. 50 33
  Pantoea sp. MT58 IAI47_17770 superoxide response transcriptional regulator SoxS insig. 48 33
  Escherichia coli BL21 ECD_03934 superoxide response regulon transcriptional activator; autoregulator insig. 47 35
  Escherichia fergusonii Becca EFB2_04529 Regulatory protein SoxS insig. 47 35
  Escherichia coli ECOR27 NOLOHH_05125 soxS_A12S regulatory protein SoxS insig. 47 35
  Escherichia coli ECOR38 HEPCGN_11490 soxS_A12S regulatory protein SoxS insig. 47 35
  Escherichia coli ECRC100 OKFHMN_12875 soxS_A12S regulatory protein SoxS cofit 47 35
  Escherichia coli ECRC101 MCAODC_03385 soxS_A12S regulatory protein SoxS insig. 47 35
  Escherichia coli ECRC102 NIAGMN_10720 soxS_A12S regulatory protein SoxS insig. 47 35