| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0036 | | integrase (NCBI ptt file) | sig. | 100 | 100 |
| o | Phocaeicola dorei CL03T12C01 | ABI39_RS11165 | | site-specific integrase | insig. | 83 | 100 |
| o | Bacteroides stercoris CC31F | HMPREF1181_RS08150 | | site-specific integrase | insig. | 64 | 100 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04671 | | site-specific recombinase, phage integrase family | insig. | 59 | 100 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS07540 | | site-specific integrase | insig. | 58 | 100 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2654 | | transposase (NCBI ptt file) | insig. | 57 | 100 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4015 | | transposase (NCBI ptt file) | insig. | 58 | 100 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS02720 | | site-specific integrase | insig. | 57 | 100 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS11660 | | site-specific integrase | insig. | 57 | 100 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS18185 | | site-specific integrase | no data | 55 | 100 |
| o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS18430 | | site-specific integrase | insig. | 51 | 100 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS14745 | | site-specific integrase | insig. | 51 | 100 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS11575 | | site-specific integrase | insig. | 64 | 72 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS05340 | | site-specific integrase | insig. | 63 | 72 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1124 | | putative integrase (NCBI ptt file) | sig. | 58 | 73 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08295 | | site-specific integrase | insig. | 58 | 73 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS13780 | | site-specific integrase | insig. | 42 | 100 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS11960 | | site-specific integrase | insig. | 55 | 72 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS16100 | | site-specific integrase | insig. | 55 | 72 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01553 | | site-specific recombinase, phage integrase family | insig. | 35 | 99 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS14985 | | site-specific integrase | insig. | 40 | 73 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS07625 | | site-specific integrase | insig. | 36 | 93 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2890 | | transposase (NCBI ptt file) | insig. | 35 | 93 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS03915 | | site-specific integrase | insig. | 38 | 72 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS13470 | | site-specific integrase | insig. | 35 | 73 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS17450 | | site-specific integrase | insig. | 34 | 73 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1793 | | integrase protein (NCBI ptt file) | insig. | 37 | 72 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2488 | | integrase (NCBI ptt file) | insig. | 35 | 72 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04571 | | site-specific recombinase, phage integrase family | insig. | 39 | 71 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04238 | | site-specific recombinase, phage integrase family | insig. | 36 | 72 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4479 | | integrase protein (NCBI ptt file) | sig. | 36 | 71 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01453 | | site-specific recombinase, phage integrase family | insig. | 35 | 72 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS13435 | | site-specific integrase | insig. | 33 | 72 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS17415 | | site-specific integrase | insig. | 34 | 72 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04234 | | site-specific recombinase, phage integrase family | insig. | 36 | 72 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1827 | | transposase (NCBI ptt file) | sig. | 35 | 71 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1657 | | integrase (NCBI ptt file) | sig. | 36 | 70 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1726 | | integrase (NCBI ptt file) | insig. | 36 | 70 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1503 | | integrase (NCBI ptt file) | sig. | 36 | 72 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2322 | | putative integrase (NCBI ptt file) | insig. | 34 | 78 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1509 | | integrase (NCBI ptt file) | insig. | 35 | 70 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1513 | | integrase (NCBI ptt file) | sig. | 35 | 71 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0595 | | integrase (NCBI ptt file) | sig. | 35 | 67 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS10515 | | site-specific integrase | insig. | 33 | 72 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS10985 | | site-specific integrase | insig. | 33 | 71 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS15680 | | site-specific integrase | insig. | 33 | 73 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3916 | | site-specific recombinase IntIA (NCBI ptt file) | insig. | 35 | 72 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01874 | | site-specific recombinase, phage integrase family | insig. | 33 | 71 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11340 | | site-specific integrase | insig. | 29 | 88 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS13110 | | site-specific integrase | insig. | 29 | 89 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02455 | | site-specific recombinase, phage integrase family | no data | 34 | 69 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS16300 | | site-specific integrase | cofit | 34 | 71 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00416 | | site-specific recombinase, phage integrase family | insig. | 35 | 66 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0291 | | integrase (NCBI ptt file) | sig. | 32 | 70 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2484 | | hypothetical protein (NCBI ptt file) | insig. | 35 | 60 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1962 | | hypothetical protein (NCBI ptt file) | sig. | 35 | 59 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0953 | | integrase (NCBI ptt file) | insig. | 31 | 71 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21970 | | site-specific integrase | insig. | 31 | 70 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS16670 | | site-specific integrase | insig. | 29 | 72 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01375 | | site-specific integrase | insig. | 28 | 88 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00197 | | site-specific recombinase, phage integrase family | sig. | 35 | 54 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05502 | | site-specific recombinase, phage integrase family | insig. | 36 | 54 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01722 | | site-specific recombinase, phage integrase family | insig. | 35 | 54 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0375 | | integrase (NCBI ptt file) | sig. | 35 | 50 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03747 | | site-specific recombinase, phage integrase family | insig. | 33 | 53 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04621 | | site-specific recombinase, phage integrase family | insig. | 28 | 99 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_16005 | | hypothetical protein | cofit | 27 | 68 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_20155 | | recombinase XerD | insig. | 30 | 57 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_11530 | | recombinase XerD | insig. | 27 | 58 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2653 | | Site-specific recombinase XerD | insig. | 26 | 64 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00029 | | site-specific recombinase, phage integrase family | no data | 27 | 91 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04100 | | site-specific recombinase, phage integrase family | no data | 27 | 91 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS07355 | | phage integrase SAM-like domain-containing protein | insig. | 28 | 73 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1041 | | integrase (NCBI ptt file) | insig. | 27 | 91 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS05340 | | site-specific integrase | insig. | 25 | 88 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS07155 | | site-specific integrase | insig. | 25 | 93 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS11580 | | site-specific integrase | insig. | 24 | 88 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11775 | | phage integrase SAM-like domain-containing protein | insig. | 26 | 95 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16050 | | site-specific integrase | insig. | 25 | 93 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS10090 | | phage integrase SAM-like domain-containing protein | insig. | 26 | 74 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01845 | | site-specific integrase | insig. | 25 | 93 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS18965 | | site-specific integrase | insig. | 26 | 97 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS15220 | | site-specific integrase | insig. | 24 | 93 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01075 | | site-specific integrase | insig. | 25 | 93 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS04870 | | phage integrase SAM-like domain-containing protein | sig. | 25 | 72 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4022 | | integrase (NCBI ptt file) | sig. | 24 | 88 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07990 | | site-specific integrase | insig. | 29 | 61 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04656 | | site-specific recombinase, phage integrase family | insig. | 24 | 88 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02269 | | hypothetical protein | insig. | 22 | 92 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4739 | | transposase (NCBI ptt file) | sig. | 24 | 61 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS03135 | | site-specific integrase | insig. | 24 | 88 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS07850 | | site-specific integrase | insig. | 25 | 61 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS01360 | | phage integrase SAM-like domain-containing protein | insig. | 24 | 78 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2980 | | transposase (NCBI ptt file) | insig. | 24 | 78 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS08185 | | site-specific integrase | insig. | 26 | 90 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS09495 | | site-specific integrase | insig. | 25 | 92 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS11685 | | recombinase | insig. | 23 | 63 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16425 | | site-specific integrase | insig. | 25 | 86 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01130 | | phage integrase SAM-like domain-containing protein | insig. | 29 | 59 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2446 | | integrase (NCBI ptt file) | insig. | 24 | 88 |
| | Cellulophaga baltica 18 | M666_RS06300 | | site-specific integrase | insig. | 22 | 90 |
| | Cellulophaga baltica 18 | M666_RS00575 | | site-specific integrase | insig. | 23 | 91 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1928 | | transposase (NCBI ptt file) | sig. | 24 | 88 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02932 | | site-specific recombinase, phage integrase family | insig. | 24 | 61 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2556 | | Site-specific recombinase XerD | insig. | 22 | 87 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2321 | | putative integrase (NCBI ptt file) | sig. | 49 | 15 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07995 | | site-specific integrase | insig. | 24 | 89 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2277 | | transposase (NCBI ptt file) | insig. | 23 | 90 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3136 | | integrase (NCBI ptt file) | insig. | 23 | 91 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3135 | | integrase (NCBI ptt file) | insig. | 23 | 88 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00006 | | hypothetical protein | no data | 38 | 25 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS09590 | | site-specific integrase | insig. | 25 | 94 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS15385 | | site-specific integrase | strong | 22 | 92 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03081 | | site-specific recombinase, phage integrase family | insig. | 21 | 89 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2447 | | integrase (NCBI ptt file) | sig. | 22 | 88 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03415 | | phage integrase SAM-like domain-containing protein | insig. | 21 | 70 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS11230 | | site-specific integrase | insig. | 24 | 87 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2990 | | hypothetical protein (NCBI ptt file) | insig. | 23 | 75 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS19895 | | site-specific integrase | insig. | 22 | 92 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3200 | | Site-specific recombinase XerD | insig. | 28 | 36 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS07665 | | site-specific integrase | insig. | 23 | 78 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03959 | | site-specific recombinase, phage integrase family | insig. | 24 | 68 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04955 | | site-specific integrase | insig. | 23 | 87 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16310 | | site-specific integrase | insig. | 24 | 95 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS13755 | | site-specific integrase | strong | 23 | 87 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0076 | | transposase (NCBI ptt file) | insig. | 22 | 87 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS02785 | | site-specific integrase | insig. | 23 | 87 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2267 | | integrase protein (NCBI ptt file) | cofit | 22 | 93 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS07455 | | tyrosine-type recombinase/integrase | insig. | 26 | 35 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2576 | | transposase (NCBI ptt file) | insig. | 22 | 61 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS17100 | | site-specific integrase | insig. | 25 | 44 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS13710 | | site-specific integrase | insig. | 23 | 59 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1929 | | transposase (NCBI ptt file) | sig. | 22 | 96 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1138 | | transposase (NCBI ptt file) | sig. | 23 | 87 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS13195 | | site-specific integrase | insig. | 24 | 87 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08365 | | site-specific integrase | insig. | 24 | 87 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS09985 | | site-specific integrase | insig. | 23 | 59 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS00625 | | tyrosine recombinase XerC | cofit | 27 | 64 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01815 | | phage integrase SAM-like domain-containing protein | insig. | 25 | 66 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08830 | | site-specific integrase | insig. | 30 | 35 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS05130 | | site-specific integrase | insig. | 24 | 87 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS09340 | | site-specific integrase | strong | 23 | 87 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4021 | | integrase (NCBI ptt file) | insig. | 22 | 92 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS04980 | | site-specific integrase | insig. | 29 | 39 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS08680 | | site-specific integrase | insig. | 24 | 87 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS15170 | | site-specific integrase | insig. | 19 | 68 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16135 | | site-specific integrase | insig. | 25 | 66 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02986 | | site-specific recombinase, phage integrase family | insig. | 23 | 62 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS12295 | | site-specific integrase | insig. | 26 | 64 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04657 | | site-specific recombinase, phage integrase family | insig. | 21 | 91 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2445 | | hypothetical protein (NCBI ptt file) | insig. | 43 | 13 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08025 | | site-specific integrase | insig. | 26 | 35 |
| | Cellulophaga baltica 18 | M666_RS12845 | | site-specific integrase | insig. | 22 | 66 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS03140 | | site-specific integrase | insig. | 21 | 91 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16430 | | site-specific integrase | insig. | 23 | 66 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05411 | | site-specific recombinase, phage integrase family | insig. | 26 | 59 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4617 | | integrase (NCBI ptt file) | insig. | 26 | 59 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS05345 | | site-specific integrase | sig. | 23 | 63 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS11585 | | site-specific integrase | cofit | 22 | 68 |
| | Agrobacterium fabrum C58 | Atu2628 | | site-specific recombinase | no data | 23 | 68 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS18190 | | site-specific integrase | no data | 23 | 80 |
| | Pseudomonas sp. BP01 | JOY50_RS11700 | xerD | site-specific tyrosine recombinase XerD | insig. | 22 | 63 |
| | Pseudomonas putida KT2440 | PP_1468 | | Tyrosine recombinase XerD | strong | 22 | 63 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01229 | xerD | site-specific tyrosine recombinase XerD | insig. | 21 | 63 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19085 | | site-specific tyrosine recombinase XerD | no data | 21 | 63 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01247 | xerD | site-specific tyrosine recombinase XerD | insig. | 21 | 63 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS05035 | | site-specific integrase | insig. | 21 | 72 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00900 | | phage integrase SAM-like domain-containing protein | no data | 18 | 68 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04958 | | site-specific recombinase, phage integrase family | insig. | 19 | 89 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS13550 | | site-specific integrase | cofit | 34 | 18 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS16000 | | site-specific integrase | insig. | 24 | 59 |