Conservation of cofitness between Xcc-8004.3923.1 and Xcc-8004.5217.1 in Xanthomonas campestris pv. campestris strain 8004

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3923.1 Short-chain dehydrogenase/reductase SDR 1.0 Xcc-8004.5217.1 Starvation sensing protein RspA 0.34 11
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS02360 SDR family oxidoreductase 0.12 A4249_RS07695 L-rhamnonate dehydratase low > 48
Pantoea sp. MT58 0.63 IAI47_09865 SDR family oxidoreductase 0.65 IAI47_06835 D-galactonate dehydratase family protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF3116 FIG00553873: hypothetical protein 0.66 GFF2489 Starvation sensing protein RspA low > 78
Escherichia coli ECOR38 0.61 HEPCGN_17840 yghA NADP(+)-dependent aldehyde reductase 0.67 HEPCGN_06185 rspA starvation-sensing protein RspA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_00696 putative oxidoreductase YghA 0.68 OHPLBJKB_02145 Starvation-sensing protein RspA low > 73
Escherichia fergusonii Becca 0.61 EFB2_00805 putative oxidoreductase YghA 0.68 EFB2_02411 D-galactonate dehydratase family member RspA low > 86
Escherichia coli BW25113 0.61 b3003 yghA oxidoreductase (NCBI) 0.68 b1581 rspA predicted dehydratase (NCBI) low > 76
Escherichia coli BL21 0.61 ECD_02878 putative oxidoreductase 0.68 ECD_01550 bifunctional D-altronate/D-mannonate dehydratase — —
Escherichia coli ECRC62 0.61 BNILDI_00760 yghA NADP(+)-dependent aldehyde reductase 0.68 BNILDI_17100 rspA starvation-sensing protein RspA low > 75
Escherichia coli ECOR27 0.61 NOLOHH_10755 yghA NADP(+)-dependent aldehyde reductase 0.68 NOLOHH_18310 rspA starvation-sensing protein RspA low > 75
Escherichia coli Nissle 1917 0.61 ECOLIN_RS17295 NADP(+)-dependent aldehyde reductase 0.68 ECOLIN_RS08840 starvation-sensing protein RspA low > 55
Klebsiella michiganensis M5al 0.60 BWI76_RS14125 SDR family oxidoreductase 0.67 BWI76_RS15895 starvation-sensing protein RspA low > 92
Enterobacter sp. TBS_079 0.60 MPMX20_02213 putative oxidoreductase YghA 0.66 MPMX20_02092 D-galactonate dehydratase family member low > 85
Rahnella sp. WP5 0.60 EX31_RS01195 SDR family oxidoreductase 0.67 EX31_RS20345 D-galactonate dehydratase family protein low > 89
Enterobacter asburiae PDN3 0.60 EX28DRAFT_1253 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.66 EX28DRAFT_1457 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 76
Mucilaginibacter yixingensis YX-36 DSM 26809 0.57 ABZR88_RS21430 SDR family oxidoreductase 0.09 ABZR88_RS13045 enolase C-terminal domain-like protein low > 71
Variovorax sp. OAS795 0.43 ABID97_RS22950 SDR family oxidoreductase 0.13 ABID97_RS13085 mandelate racemase/muconate lactonizing enzyme family protein low > 91
Variovorax sp. SCN45 0.23 GFF2166 Oxidoreductase, short-chain dehydrogenase/reductase family 0.70 GFF178 Mannonate dehydratase (EC 4.2.1.8) — —
Dickeya dianthicola 67-19 0.23 HGI48_RS06980 SDR family oxidoreductase 0.67 HGI48_RS15065 D-galactonate dehydratase family protein low > 71

Not shown: 32 genomes with orthologs for Xcc-8004.3923.1 only; 14 genomes with orthologs for Xcc-8004.5217.1 only