Conservation of cofitness between Psyr_4909 and Psyr_4575 in Pseudomonas syringae pv. syringae B728a

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.0 Psyr_4575 adenosylmethionine decarboxylase proenzyme 0.42 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.00 Psyr_4575 adenosylmethionine decarboxylase proenzyme low > 86
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_12005 GABA permease 0.91 AO353_07190 S-adenosylmethionine decarboxylase proenzyme low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_375 transport permease protein of gamma-aminobutyrate 0.90 PfGW456L13_1226 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A low > 87
Pantoea sp. MT58 0.72 IAI47_19470 GABA permease 0.69 IAI47_15715 adenosylmethionine decarboxylase low > 76
Escherichia coli BL21 0.67 ECD_02519 gamma-aminobutyrate transporter 0.70 ECD_00119 S-adenosylmethionine decarboxylase low > 61
Escherichia coli ECRC98 0.67 JDDGAC_24565 gabP GABA permease 0.70 JDDGAC_14065 speD adenosylmethionine decarboxylase low > 86
Escherichia coli ECRC101 0.67 MCAODC_11425 gabP GABA permease 0.70 MCAODC_00985 speD adenosylmethionine decarboxylase low > 87
Escherichia coli ECRC102 0.67 NIAGMN_18670 gabP GABA permease 0.70 NIAGMN_08320 speD adenosylmethionine decarboxylase — —
Escherichia coli ECRC99 0.67 KEDOAH_07235 gabP GABA permease 0.70 KEDOAH_17685 speD adenosylmethionine decarboxylase — —
Escherichia coli ECRC100 0.67 OKFHMN_20905 gabP GABA permease 0.70 OKFHMN_10470 speD adenosylmethionine decarboxylase low > 80
Escherichia coli BW25113 0.67 b2663 gabP gamma-aminobutyrate transporter (NCBI) 0.70 b0120 speD S-adenosylmethionine decarboxylase proenzyme (NCBI) low > 76
Escherichia coli ECOR38 0.67 HEPCGN_20160 gabP GABA permease 0.70 HEPCGN_08450 speD adenosylmethionine decarboxylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01069 GABA permease 0.70 OHPLBJKB_03541 S-adenosylmethionine decarboxylase proenzyme low > 73
Escherichia coli Nissle 1917 0.67 ECOLIN_RS14850 GABA permease 0.70 ECOLIN_RS00670 adenosylmethionine decarboxylase — —
Escherichia coli ECOR27 0.67 NOLOHH_12730 gabP GABA permease 0.70 NOLOHH_24555 speD adenosylmethionine decarboxylase low > 75
Escherichia fergusonii Becca 0.67 EFB2_01267 GABA permease 0.70 EFB2_03925 S-adenosylmethionine decarboxylase proenzyme low > 86
Escherichia coli ECRC62 0.67 BNILDI_11290 gabP GABA permease 0.70 BNILDI_08795 speD adenosylmethionine decarboxylase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1568 gamma-aminobutyrate (GABA) permease 0.70 GFF108 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A low > 78
Lysobacter sp. OAE881 0.34 ABIE51_RS01430 amino acid permease 0.67 ABIE51_RS04215 adenosylmethionine decarboxylase — —
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.1650.1 amino acid transporter 0.67 Xcc-8004.625.1 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A — —

Not shown: 18 genomes with orthologs for Psyr_4909 only; 16 genomes with orthologs for Psyr_4575 only