Conservation of cofitness between Psyr_4225 and Psyr_2497 in Pseudomonas syringae pv. syringae B728a

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4225 galactarate dehydratase 1.0 Psyr_2497 lipoprotein, putative 0.44 6
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4225 galactarate dehydratase 1.00 Psyr_2497 lipoprotein, putative low > 86
Variovorax sp. SCN45 0.67 GFF2921 D-galactarate dehydratase (EC 4.2.1.42) 0.49 GFF6266 putative lipoprotein low > 127
Variovorax sp. OAS795 0.65 ABID97_RS10325 galactarate dehydratase 0.51 ABID97_RS04865 DUF3053 domain-containing protein low > 91
Escherichia coli BW25113 0.63 b3128 garD (D)-galactarate dehydrogenase (NCBI) 0.21 b3554 yiaF orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC101 0.63 MCAODC_08865 garD galactarate dehydratase 0.21 MCAODC_06530 yiaF Uncharacterized protein YiaF low > 87
Escherichia coli ECRC98 0.63 JDDGAC_21985 garD galactarate dehydratase 0.21 JDDGAC_19645 yiaF Uncharacterized protein YiaF low > 87
Escherichia coli ECRC99 0.63 KEDOAH_09795 garD galactarate dehydratase 0.21 KEDOAH_12135 yiaF Uncharacterized protein YiaF — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS17975 galactarate dehydratase 0.21 ECOLIN_RS20335 DUF3053 domain-containing protein — —
Escherichia coli BL21 0.63 ECD_02993 D-galactarate dehydrogenase 0.21 ECD_03404 barrier effect co-colonization resistance factor; DUF3053 family lipoprotein low > 61
Escherichia coli ECRC100 0.63 OKFHMN_18355 garD galactarate dehydratase 0.21 OKFHMN_16015 yiaF Uncharacterized protein YiaF low > 79
Escherichia coli ECRC102 0.63 NIAGMN_16115 garD galactarate dehydratase 0.21 NIAGMN_13775 yiaF Uncharacterized protein YiaF low > 80
Escherichia fergusonii Becca 0.62 EFB2_00691 Galactarate dehydratase (L-threo-forming) 0.21 EFB2_00253 hypothetical protein low > 86
Escherichia coli ECOR38 0.62 HEPCGN_17190 garD galactarate dehydratase 0.21 HEPCGN_14905 yiaF Uncharacterized protein YiaF low > 88
Pectobacterium carotovorum WPP14 0.62 HER17_RS04070 galactarate dehydratase 0.23 HER17_RS21140 DUF3053 domain-containing protein low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_00575 Galactarate dehydratase (L-threo-forming) 0.21 OHPLBJKB_00152 hypothetical protein low > 74
Escherichia coli ECRC62 0.62 BNILDI_01395 garD galactarate dehydratase 0.21 BNILDI_03585 yiaF Uncharacterized protein YiaF low > 75
Escherichia coli ECOR27 0.62 NOLOHH_10135 garD galactarate dehydratase 0.21 NOLOHH_07960 yiaF Uncharacterized protein YiaF low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF1534 D-galactarate dehydratase (EC 4.2.1.42) 0.20 GFF457 probable exported protein YPO4070 low > 78
Enterobacter sp. TBS_079 0.62 MPMX20_04037 Galactarate dehydratase (L-threo-forming) 0.21 MPMX20_00175 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.62 EX28DRAFT_3184 galactarate dehydratase 0.21 EX28DRAFT_3820 Protein of unknown function (DUF3053) low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS24840 galactarate dehydratase 0.21 BWI76_RS26965 hypothetical protein 0.16 60
Klebsiella pneumoniae MKP103 0.61 KDGMDA_05710 galactarate dehydratase 0.20 KDGMDA_07695 DUF3053 domain-containing protein low > 95
Erwinia tracheiphila SCR3 0.61 LU632_RS06305 garD galactarate dehydratase 0.27 LU632_RS00180 DUF3053 domain-containing protein low > 73
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_17330 garD galactarate dehydratase 0.27 IJEDHG_10000 DUF3053 domain-containing protein low > 61
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS16895 galactarate dehydratase 0.25 PagCFBP13505_RS15730 DUF3053 domain-containing protein low > 74
Pantoea sp. MT58 0.60 IAI47_04075 galactarate dehydratase 0.23 IAI47_18695 DUF3053 domain-containing protein low > 76
Serratia liquefaciens MT49 0.22 IAI46_22215 altronate dehydratase 0.25 IAI46_00150 DUF3053 domain-containing protein low > 87

Not shown: 58 genomes with orthologs for Psyr_4225 only; 1 genomes with orthologs for Psyr_2497 only