Conservation of cofitness between PP_2196 and PP_2601 in Pseudomonas putida KT2440

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2196 agmatinase 1.0 PP_2601 Transcriptional regulator, IclR family 0.15 9
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_4717 Agmatinase (EC 3.5.3.11) 0.77 Pf1N1B4_2744 Transcriptional regulator, IclR family low > 87
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_2989 Agmatinase (EC 3.5.3.11) 0.76 PfGW456L13_1419 Transcriptional regulator, IclR family low > 87
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS11320 agmatinase 0.48 QEN71_RS38820 IclR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS26640 agmatinase 0.48 BPHYT_RS20440 IclR family transcriptional regulator low > 109
Agrobacterium fabrum C58 0.49 Atu1245 agmatinase 0.29 Atu4599 IclR family transcriptional regulator low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3030 Agmatinase (EC 3.5.3.11) 0.20 GFF1356 Acetate operon repressor low > 78
Escherichia coli ECOR38 0.47 HEPCGN_18620 speB agmatinase 0.20 HEPCGN_11890 iclR glyoxylate bypass operon transcriptional repressor IclR low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2977 agmatinase 0.20 EX28DRAFT_4327 transcriptional regulator, IclR family 0.58 37
Enterobacter sp. TBS_079 0.47 MPMX20_03798 Agmatinase 0.21 MPMX20_00234 Transcriptional repressor IclR low > 85
Escherichia coli BL21 0.46 ECD_02767 agmatinase 0.20 ECD_03890 transcriptional repressor low > 60
Escherichia coli BW25113 0.46 b2937 speB agmatinase (NCBI) 0.20 b4018 iclR repressor of aceBA operon (VIMSS) low > 76
Escherichia coli Nissle 1917 0.46 ECOLIN_RS16340 agmatinase 0.20 ECOLIN_RS23155 glyoxylate bypass operon transcriptional repressor IclR low > 52
Escherichia coli ECRC101 0.46 OKFHMN_19315 speB agmatinase 0.20 OKFHMN_13245 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Escherichia fergusonii Becca 0.46 EFB2_00964 Agmatinase 0.20 EFB2_04593 Transcriptional repressor IclR low > 86
Escherichia coli ECRC101 0.46 MCAODC_09835 speB agmatinase 0.20 MCAODC_03745 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Escherichia coli ECOR27 0.46 NOLOHH_11185 speB agmatinase 0.20 NOLOHH_05385 iclR glyoxylate bypass operon transcriptional repressor IclR low > 57
Escherichia coli ECRC98 0.46 JDDGAC_22945 speB agmatinase 0.20 JDDGAC_16870 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Escherichia coli ECRC99 0.46 KEDOAH_08825 speB agmatinase 0.20 KEDOAH_14915 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Escherichia coli ECRC62 0.46 BNILDI_09765 speB agmatinase 0.20 BNILDI_06135 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Escherichia coli ECRC102 0.46 NIAGMN_17080 speB agmatinase 0.20 NIAGMN_10995 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Klebsiella michiganensis M5al 0.46 BWI76_RS24025 agmatinase 0.20 BWI76_RS01680 transcriptional regulator IclR low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00779 Agmatinase 0.20 OHPLBJKB_04031 Transcriptional repressor IclR low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF2044 Agmatinase (EC 3.5.3.11) 0.51 GFF3860 Transcriptional regulator, IclR family low > 90
Variovorax sp. SCN45 0.12 GFF3772 Arginase (EC 3.5.3.1) 0.47 GFF1520 Transcriptional regulator, IclR family low > 127
Parabacteroides merdae CL09T00C40 0.11 HMPREF1078_RS12610 arginase 0.16 HMPREF1078_RS01425 IclR family transcriptional regulator low > 61

Not shown: 18 genomes with orthologs for PP_2196 only; 10 genomes with orthologs for PP_2601 only