Conservation of cofitness between PP_5107 and PP_2077 in Pseudomonas putida KT2440

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5107 Monofunctional biosynthetic peptidoglycan transglycosylase 1.0 PP_2077 diaminopimelate decarboxylase 0.29 1
Pectobacterium carotovorum WPP14 0.49 HER17_RS19890 monofunctional biosynthetic peptidoglycan transglycosylase 0.59 HER17_RS03710 diaminopimelate decarboxylase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF2952 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 0.58 GFF1323 Diaminopimelate decarboxylase (EC 4.1.1.20) low > 78
Dickeya dadantii 3937 0.48 DDA3937_RS01685 monofunctional biosynthetic peptidoglycan transglycosylase 0.58 DDA3937_RS17425 diaminopimelate decarboxylase low > 74
Escherichia coli ECOR27 0.48 NOLOHH_09710 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.57 NOLOHH_11830 lysA diaminopimelate decarboxylase low > 57
Escherichia coli ECRC62 0.48 BNILDI_01825 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.57 BNILDI_10310 lysA diaminopimelate decarboxylase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_00492 Biosynthetic peptidoglycan transglycosylase 0.58 OHPLBJKB_00891 Diaminopimelate decarboxylase low > 73
Escherichia fergusonii Becca 0.48 EFB2_00615 Biosynthetic peptidoglycan transglycosylase 0.57 EFB2_01045 Diaminopimelate decarboxylase low > 86
Escherichia coli BW25113 0.48 b3208 mtgA monofunctional biosynthetic peptidoglycan transglycosylase (NCBI) 0.58 b2838 lysA diaminopimelate decarboxylase, PLP-binding (NCBI) low > 76
Escherichia coli BL21 0.48 ECD_03073 biosynthetic peptidoglycan transglycosylase 0.58 ECD_02686 diaminopimelate decarboxylase, PLP-binding low > 60
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3261 monofunctional biosynthetic peptidoglycan transglycosylase 0.58 EX28DRAFT_2916 diaminopimelate decarboxylase low > 76
Escherichia coli Nissle 1917 0.48 ECOLIN_RS18455 monofunctional biosynthetic peptidoglycan transglycosylase 0.57 ECOLIN_RS15930 diaminopimelate decarboxylase low > 52
Rahnella sp. WP5 0.47 EX31_RS12525 monofunctional biosynthetic peptidoglycan transglycosylase 0.58 EX31_RS13275 diaminopimelate decarboxylase low > 89
Dickeya dianthicola 67-19 0.47 HGI48_RS01580 monofunctional biosynthetic peptidoglycan transglycosylase 0.58 HGI48_RS17485 diaminopimelate decarboxylase low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS01655 monofunctional biosynthetic peptidoglycan transglycosylase 0.58 DZA65_RS18550 diaminopimelate decarboxylase low > 75
Escherichia coli ECOR38 0.47 HEPCGN_16785 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.57 HEPCGN_19565 lysA diaminopimelate decarboxylase low > 85
Serratia liquefaciens MT49 0.47 IAI46_22325 monofunctional biosynthetic peptidoglycan transglycosylase 0.59 IAI46_20520 diaminopimelate decarboxylase low > 86
Escherichia coli ECRC101 0.46 OKFHMN_17910 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.58 OKFHMN_19945 lysA diaminopimelate decarboxylase — —
Escherichia coli ECRC99 0.46 KEDOAH_10240 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.58 KEDOAH_08185 lysA diaminopimelate decarboxylase — —
Escherichia coli ECRC98 0.46 JDDGAC_21535 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.58 JDDGAC_23610 lysA diaminopimelate decarboxylase — —
Escherichia coli ECRC102 0.46 NIAGMN_15670 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.58 NIAGMN_17715 lysA diaminopimelate decarboxylase — —
Escherichia coli ECRC101 0.46 MCAODC_08430 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.58 MCAODC_10470 lysA diaminopimelate decarboxylase — —
Enterobacter sp. TBS_079 0.46 MPMX20_04113 Biosynthetic peptidoglycan transglycosylase 0.58 MPMX20_03705 Diaminopimelate decarboxylase low > 85
Erwinia tracheiphila SCR3 0.45 LU632_RS21305 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 0.56 LU632_RS06040 lysA diaminopimelate decarboxylase low > 74
Klebsiella michiganensis M5al 0.44 BWI76_RS25290 monofunctional biosynthetic peptidoglycan transglycosylase 0.57 BWI76_RS23360 diaminopimelate decarboxylase low > 92
Pantoea sp. MT58 0.40 IAI47_17210 monofunctional biosynthetic peptidoglycan transglycosylase 0.60 IAI47_03860 diaminopimelate decarboxylase low > 76
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS16970 monofunctional biosynthetic peptidoglycan transglycosylase 0.56 BPHYT_RS35090 diaminopimelate decarboxylase 0.38 73

Not shown: 56 genomes with orthologs for PP_5107 only; 3 genomes with orthologs for PP_2077 only