Conservation of cofitness between OKFHMN_02265 and OKFHMN_20815 in Escherichia coli ECRC100

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_02265 pgrR DNA-binding transcriptional regulator PgrR 1.0 OKFHMN_20815 proW glycine betaine/L-proline ABC transporter permease ProW 0.75 10
Escherichia coli ECRC101 1.00 MCAODC_16005 pgrR DNA-binding transcriptional regulator PgrR 1.00 MCAODC_11340 proW glycine betaine/L-proline ABC transporter permease ProW low > 87
Escherichia coli ECRC99 1.00 KEDOAH_26505 pgrR DNA-binding transcriptional regulator PgrR 1.00 KEDOAH_07320 proW glycine betaine/L-proline ABC transporter permease ProW — —
Escherichia coli ECRC98 1.00 JDDGAC_04810 pgrR DNA-binding transcriptional regulator PgrR 1.00 JDDGAC_24480 proW glycine betaine/L-proline ABC transporter permease ProW 0.57 81
Escherichia coli ECRC102 1.00 NIAGMN_26435 pgrR DNA-binding transcriptional regulator PgrR 1.00 NIAGMN_18585 proW glycine betaine/L-proline ABC transporter permease ProW — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02353 HTH-type transcriptional regulator PgrR 1.00 OHPLBJKB_01054 Glycine betaine/proline betaine transport system permease protein ProW low > 73
Escherichia coli BL21 1.00 ECD_01306 murein peptide degradation regulator 1.00 ECD_02534 glycine betaine/proline ABC transporter permease — —
Escherichia coli BW25113 1.00 b1328 ycjZ predicted DNA-binding transcriptional regulator (NCBI) 1.00 b2678 proW glycine betaine transporter subunit (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_19965 pgrR DNA-binding transcriptional regulator PgrR 1.00 NOLOHH_12655 proW glycine betaine/L-proline ABC transporter permease ProW low > 75
Escherichia coli ECRC62 1.00 BNILDI_18115 pgrR DNA-binding transcriptional regulator PgrR 1.00 BNILDI_11215 proW glycine betaine/L-proline ABC transporter permease ProW low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07975 DNA-binding transcriptional regulator PgrR 1.00 ECOLIN_RS14935 glycine betaine/L-proline ABC transporter permease ProW low > 55
Escherichia fergusonii Becca 0.99 EFB2_02598 HTH-type transcriptional regulator PgrR 1.00 EFB2_01249 Glycine betaine/proline betaine transport system permease protein ProW low > 86
Dickeya dadantii 3937 0.68 DDA3937_RS12385 LysR family transcriptional regulator 0.81 DDA3937_RS16725 glycine betaine/L-proline ABC transporter permease ProW low > 74
Dickeya dianthicola ME23 0.68 DZA65_RS07300 LysR family transcriptional regulator 0.79 DZA65_RS17880 glycine betaine/L-proline ABC transporter permease ProW low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS06955 LysR family transcriptional regulator 0.79 HGI48_RS16805 glycine betaine/L-proline ABC transporter permease ProW low > 71
Pectobacterium carotovorum WPP14 0.53 HER17_RS06580 LysR family transcriptional regulator 0.81 HER17_RS04500 glycine betaine/L-proline ABC transporter permease ProW low > 75
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1046 Transcriptional regulator 0.87 EX28DRAFT_2764 ABC-type proline/glycine betaine transport system, permease component low > 76
Escherichia coli ECOR38 0.51 HEPCGN_07680 lysR LysR family transcriptional regulator 1.00 HEPCGN_20015 proW glycine betaine/L-proline ABC transporter permease ProW low > 87
Variovorax sp. SCN45 0.50 GFF907 Transcriptional regulator, LysR family 0.56 GFF481 Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) low > 127
Serratia liquefaciens MT49 0.50 IAI46_12365 LysR family transcriptional regulator 0.79 IAI46_19955 glycine betaine/L-proline ABC transporter permease ProW low > 86
Rahnella sp. WP5 0.50 EX31_RS20830 LysR family transcriptional regulator 0.76 EX31_RS13615 glycine betaine/L-proline ABC transporter permease ProW low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS18485 LysR family transcriptional regulator 0.86 BWI76_RS22070 proline/betaine ABC transporter permease ProW low > 92
Enterobacter sp. TBS_079 0.49 MPMX20_02525 HTH-type transcriptional regulator PgrR 0.87 MPMX20_03559 Glycine betaine/proline betaine transport system permease protein ProW low > 85
Pantoea sp. MT58 0.39 IAI47_21445 LysR family transcriptional regulator 0.82 IAI47_04520 glycine betaine/L-proline ABC transporter permease ProW low > 76
Agrobacterium fabrum C58 0.38 Atu0261 transcriptional regulator, LysR family 0.38 Atu5219 ABC transporter membrane spanning protein (glycine betaine/L-proline) — —
Rhodospirillum rubrum S1H 0.33 Rru_A1060 Transcriptional Regulator, LysR family (NCBI) 0.61 Rru_A2476 Binding-protein-dependent transport systems inner membrane component (NCBI) — —

Not shown: 26 genomes with orthologs for OKFHMN_02265 only; 6 genomes with orthologs for OKFHMN_20815 only