Conservation of cofitness between NOLOHH_15535 and NOLOHH_11870 in Escherichia coli ECOR27

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 NOLOHH_11870 ygdQ UPF0053 inner membrane protein YgdQ 0.66 11
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_10510 ygdQ UPF0053 inner membrane protein YgdQ low > 87
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 BNILDI_10350 ygdQ UPF0053 inner membrane protein YgdQ low > 75
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_17755 ygdQ UPF0053 inner membrane protein YgdQ — —
Escherichia coli ECRC98 1.00 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 JDDGAC_23650 ygdQ UPF0053 inner membrane protein YgdQ low > 86
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_08145 ygdQ UPF0053 inner membrane protein YgdQ — —
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_19985 ygdQ UPF0053 inner membrane protein YgdQ low > 80
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 1.00 ECD_02680 UPF0053 family inner membrane protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01628 Multidrug resistance protein MdtC 1.00 OHPLBJKB_00897 hypothetical protein low > 73
Escherichia coli BW25113 1.00 b2076 mdtC multidrug efflux system, subunit C (NCBI) 1.00 b2832 ygdQ predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 HEPCGN_19240 ygdQ UPF0053 inner membrane protein YgdQ low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 1.00 ECOLIN_RS15900 TerC family protein — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 1.00 EFB2_01051 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.91 GFF1315 FIG003462: membrane protein low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.88 BWI76_RS23295 tellurium resistance protein TerC low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.78 IAI46_20465 TerC family protein low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.81 HER17_RS16595 TerC family protein low > 75
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.77 IAI47_03905 TerC family protein low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.78 HGI48_RS04945 TerC family protein low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.79 DDA3937_RS04935 TerC family protein low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.78 DZA65_RS05280 TerC family protein low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.77 LU632_RS06090 TerC family protein low > 74
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.51 AO353_11035 hypothetical protein low > 101
Pseudomonas sp. S08-1 0.55 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.53 OH686_12060 UPF0053 inner membrane protein YgdQ low > 80
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.53 PfGW456L13_634 Integral membrane protein TerC low > 87
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.53 Pf6N2E2_4139 Integral membrane protein TerC low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.49 AO356_11355 hypothetical protein low > 104
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.52 PFR28_04647 hypothetical protein low > 88

Not shown: 35 genomes with orthologs for NOLOHH_15535 only; 2 genomes with orthologs for NOLOHH_11870 only