Conservation of cofitness between JDDGAC_23205 and JDDGAC_21750 in Escherichia coli ECRC98

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_23205 fldB flavodoxin FldB 1.0 JDDGAC_21750 truB tRNA pseudouridine(55) synthase TruB 0.89 8
Escherichia coli ECRC102 1.00 NIAGMN_17330 fldB flavodoxin FldB 1.00 NIAGMN_15885 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC99 1.00 KEDOAH_08575 fldB flavodoxin FldB 1.00 KEDOAH_10025 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC100 1.00 OKFHMN_19565 fldB flavodoxin FldB 1.00 OKFHMN_18125 truB tRNA pseudouridine(55) synthase TruB 0.78 23
Escherichia coli ECOR27 1.00 NOLOHH_11490 fldB flavodoxin FldB 1.00 NOLOHH_09925 truB tRNA pseudouridine(55) synthase TruB low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16130 flavodoxin FldB 1.00 ECOLIN_RS18185 tRNA pseudouridine(55) synthase TruB low > 55
Escherichia fergusonii Becca 1.00 EFB2_01006 Flavodoxin 2 1.00 EFB2_00657 tRNA pseudouridine synthase B low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00820 Flavodoxin 2 1.00 OHPLBJKB_00534 tRNA pseudouridine synthase B low > 73
Escherichia coli BL21 1.00 ECD_02727 flavodoxin 2 1.00 ECD_03033 tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase 0.67 49
Escherichia coli ECRC101 1.00 MCAODC_10085 fldB flavodoxin FldB 1.00 MCAODC_08645 truB tRNA pseudouridine(55) synthase TruB low > 87
Escherichia coli ECOR38 1.00 HEPCGN_18855 fldB flavodoxin FldB 1.00 HEPCGN_17000 truB tRNA pseudouridine(55) synthase TruB low > 87
Escherichia coli BW25113 1.00 b2895 fldB flavodoxin 2 (NCBI) 1.00 b3166 truB tRNA pseudouridine synthase B (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_10020 fldB flavodoxin FldB 1.00 BNILDI_01610 truB tRNA pseudouridine(55) synthase TruB 0.56 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2992 Flavodoxin 2 0.95 GFF1500 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.94 1
Klebsiella michiganensis M5al 0.92 BWI76_RS23820 flavodoxin FldB 0.91 BWI76_RS25080 tRNA pseudouridine(55) synthase 0.23 30
Enterobacter sp. TBS_079 0.91 MPMX20_03754 Flavodoxin 2 0.91 MPMX20_04071 tRNA pseudouridine synthase B low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2946 flavodoxin, long chain 0.92 EX28DRAFT_3217 tRNA pseudouridine(55) synthase low > 76
Dickeya dadantii 3937 0.80 DDA3937_RS03290 flavodoxin FldB 0.77 DDA3937_RS03080 tRNA pseudouridine(55) synthase TruB low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS03430 flavodoxin FldB 0.76 HGI48_RS03250 tRNA pseudouridine(55) synthase TruB low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS03475 flavodoxin FldB 0.75 DZA65_RS03245 tRNA pseudouridine(55) synthase TruB low > 75
Pantoea sp. MT58 0.79 IAI47_03815 flavodoxin FldB 0.74 IAI47_17015 tRNA pseudouridine(55) synthase TruB low > 76
Serratia liquefaciens MT49 0.77 IAI46_20735 flavodoxin FldB 0.82 IAI46_01945 tRNA pseudouridine(55) synthase TruB low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS17905 flavodoxin FldB 0.78 HER17_RS18200 tRNA pseudouridine(55) synthase TruB low > 75
Rahnella sp. WP5 0.75 EX31_RS13485 flavodoxin FldB 0.75 EX31_RS08530 tRNA pseudouridine(55) synthase TruB low > 89
Erwinia tracheiphila SCR3 0.75 LU632_RS05970 fldB flavodoxin FldB 0.74 LU632_RS21050 truB tRNA pseudouridine(55) synthase TruB low > 74
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_12255 flavodoxin FldB 0.67 CSW01_03400 tRNA pseudouridine(55) synthase TruB low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03432 Flavodoxin 0.49 MIT1002_01773 tRNA pseudouridine synthase B — —

Not shown: 0 genomes with orthologs for JDDGAC_23205 only; 57 genomes with orthologs for JDDGAC_21750 only