| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli ECRC98 | 1.0 | JDDGAC_09800 | ldtB | L,D-transpeptidase | 1.0 | JDDGAC_21190 | yrdB | Uncharacterized protein YrdB | 0.92 | 20 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_01875 | ldtB | L,D-transpeptidase | 0.94 | HEPCGN_16390 | yrdB | Uncharacterized protein YrdB | low | > 87 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_06165 | ldtB | L,D-transpeptidase | 1.00 | OKFHMN_17570 | yrdB | Uncharacterized protein YrdB | low | > 80 |
| Escherichia coli BW25113 | 1.00 | b0819 | ybiS | hypothetical protein (NCBI) | 0.97 | b3280 | yrdB | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_04210 | ldtB | L,D-transpeptidase | 1.00 | NIAGMN_15330 | yrdB | Uncharacterized protein YrdB | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_25380 | ldtB | L,D-transpeptidase | 1.00 | MCAODC_08090 | yrdB | Uncharacterized protein YrdB | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02894 | | putative L,D-transpeptidase YbiS | 0.97 | OHPLBJKB_00423 | | hypothetical protein | low | > 73 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS04365 | | L,D-transpeptidase | 0.97 | ECOLIN_RS18835 | | DUF1488 domain-containing protein | — | — |
| Escherichia coli BL21 | 1.00 | ECD_00786 | | L,D-transpeptidase linking Lpp to murein | 0.97 | ECD_03131 | | DUF1488 family protein | low | > 61 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_20795 | ldtB | L,D-transpeptidase | 0.98 | BNILDI_02160 | yrdB | Uncharacterized protein YrdB | low | > 75 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_22515 | ldtB | L,D-transpeptidase | 0.98 | NOLOHH_09360 | yrdB | Uncharacterized protein YrdB | low | > 75 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_21745 | ldtB | L,D-transpeptidase | 1.00 | KEDOAH_10580 | yrdB | Uncharacterized protein YrdB | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_03286 | | putative L,D-transpeptidase YbiS | 0.97 | EFB2_00543 | | hypothetical protein | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF716 | | L,D-transpeptidase YbiS | 0.73 | GFF2398 | | FIG00640156: hypothetical protein | low | > 78 |
| Klebsiella michiganensis M5al | 0.93 | BWI76_RS09030 | | transpeptidase | 0.69 | BWI76_RS25640 | | hypothetical protein | low | > 92 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_01456 | | putative L,D-transpeptidase YbiS | 0.62 | MPMX20_04188 | | hypothetical protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2148 | | Uncharacterized protein conserved in bacteria | 0.63 | EX28DRAFT_0047 | | Protein of unknown function (DUF1488) | low | > 76 |
| Pantoea sp. MT58 | 0.72 | IAI47_13415 | | L,D-transpeptidase family protein | 0.52 | IAI47_02320 | | DUF1488 domain-containing protein | low | > 76 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS03570 | | L,D-transpeptidase family protein | 0.49 | DDA3937_RS19095 | | DUF1488 domain-containing protein | low | > 74 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS03790 | | L,D-transpeptidase family protein | 0.48 | DZA65_RS20310 | | DUF1488 domain-containing protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS03670 | | L,D-transpeptidase family protein | 0.46 | HGI48_RS19185 | | DUF1488 domain-containing protein | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS17580 | | L,D-transpeptidase family protein | 0.53 | HER17_RS02255 | | DUF1488 domain-containing protein | low | > 75 |
| Shewanella sp. ANA-3 | 0.60 | Shewana3_0844 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.32 | Shewana3_0044 | | hypothetical protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.59 | SO3748 | | LysM domain protein (NCBI ptt file) | 0.33 | SO0041 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
Not shown: 9 genomes with orthologs for JDDGAC_09800 only; 1 genomes with orthologs for JDDGAC_21190 only