Conservation of cofitness between IAI47_15445 and IAI47_08680 in Pantoea sp. MT58

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_15445 lysine decarboxylase LdcC 1.0 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.78 9
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases 0.67 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase low > 76
Escherichia coli ECRC99 0.83 KEDOAH_18030 ldcC lysine decarboxylase LdcC 0.69 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli BW25113 0.83 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) 0.68 b1835 yebU putative nucleolar proteins (VIMSS) low > 76
Escherichia coli ECRC101 0.83 MCAODC_00640 ldcC lysine decarboxylase LdcC 0.69 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_03477 Constitutive lysine decarboxylase 0.68 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F low > 73
Escherichia coli ECRC102 0.83 NIAGMN_07975 ldcC lysine decarboxylase LdcC 0.69 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli ECRC101 0.83 OKFHMN_10125 ldcC lysine decarboxylase LdcC 0.69 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Enterobacter sp. TBS_079 0.83 MPMX20_00870 Constitutive lysine decarboxylase 0.67 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F low > 85
Escherichia coli ECOR27 0.83 NOLOHH_02470 ldcC lysine decarboxylase LdcC 0.69 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli BL21 0.83 ECD_00184 lysine decarboxylase 2, constitutive 0.69 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent — —
Escherichia coli ECRC98 0.83 JDDGAC_13720 ldcC lysine decarboxylase LdcC 0.69 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli Nissle 1917 0.83 ECOLIN_RS01010 lysine decarboxylase LdcC 0.68 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Serratia liquefaciens MT49 0.83 IAI46_20175 lysine decarboxylase LdcC 0.62 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 86
Escherichia coli ECRC62 0.83 BNILDI_09200 ldcC lysine decarboxylase LdcC 0.69 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli ECOR38 0.83 HEPCGN_08080 ldcC lysine decarboxylase LdcC 0.69 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 85
Escherichia fergusonii Becca 0.83 EFB2_03858 Constitutive lysine decarboxylase 0.68 EFB2_02166 Ribosomal RNA small subunit methyltransferase F low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF35 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) 0.68 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) low > 78
Rahnella sp. WP5 0.83 EX31_RS12950 lysine decarboxylase LdcC 0.62 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 89
Klebsiella michiganensis M5al 0.82 BWI76_RS05300 lysine decarboxylase LdcC 0.66 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 92
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_01445 lysine decarboxylase 0.55 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 62
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_0656 Arginine/lysine/ornithine decarboxylases 0.46 B158DRAFT_0839 NOL1/NOP2/sun family putative RNA methylase low > 40

Not shown: 28 genomes with orthologs for IAI47_15445 only; 17 genomes with orthologs for IAI47_08680 only