Conservation of cofitness between IAI47_13315 and IAI47_04035 in Pantoea sp. MT58

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_13315 ABC transporter permease 1.0 IAI47_04035 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.19 16
Enterobacter sp. TBS_079 0.70 MPMX20_03096 Glycine betaine uptake system permease protein YehW 0.83 MPMX20_03669 Ribosomal RNA large subunit methyltransferase M 0.22 37
Enterobacter asburiae PDN3 0.69 EX28DRAFT_0433 ABC-type proline/glycine betaine transport systems, permease component 0.83 EX28DRAFT_2881 Predicted SAM-dependent methyltransferase low > 76
Klebsiella michiganensis M5al 0.69 BWI76_RS19490 binding-protein-dependent transport system inner membrane protein 0.83 BWI76_RS22945 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.17 32
Escherichia coli ECRC99 0.66 KEDOAH_04510 yehW glycine betaine ABC transporter permease YehW 0.81 KEDOAH_08000 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia coli ECRC102 0.66 NIAGMN_21440 yehW glycine betaine ABC transporter permease YehW 0.81 NIAGMN_17900 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia coli BL21 0.66 ECD_02058 putative ABC transporter permease 0.81 ECD_02657 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent low > 60
Escherichia coli ECRC62 0.66 BNILDI_14165 yehW glycine betaine ABC transporter permease YehW 0.81 BNILDI_10515 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia coli ECOR27 0.66 NOLOHH_15215 yehW glycine betaine ABC transporter permease YehW 0.81 NOLOHH_12010 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia coli ECRC101 0.66 OKFHMN_23675 yehW glycine betaine ABC transporter permease YehW 0.81 OKFHMN_20130 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia coli ECOR38 0.66 HEPCGN_02250 yehW glycine betaine ABC transporter permease YehW 0.81 HEPCGN_19385 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_01582 Glycine betaine uptake system permease protein YehW 0.81 OHPLBJKB_00925 Ribosomal RNA large subunit methyltransferase M low > 73
Escherichia coli ECRC101 0.66 MCAODC_14725 yehW glycine betaine ABC transporter permease YehW 0.81 MCAODC_10655 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia coli ECRC98 0.66 JDDGAC_27630 yehW glycine betaine ABC transporter permease YehW 0.81 JDDGAC_23795 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia coli BW25113 0.65 b2128 yehW predicted transporter subunit: membrane component of ABC superfamily (NCBI) 0.81 b2806 ygdE predicted methyltransferase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF3817 Osmoprotectant ABC transporter inner membrane protein YehW 0.80 GFF4863 'LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM' transl_table=11 low > 78
Escherichia coli Nissle 1917 0.65 ECOLIN_RS12470 glycine betaine ABC transporter permease YehW 0.82 ECOLIN_RS15640 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM — —
Escherichia fergusonii Becca 0.65 EFB2_01727 Glycine betaine uptake system permease protein YehW 0.82 EFB2_01111 Ribosomal RNA large subunit methyltransferase M low > 86
Serratia liquefaciens MT49 0.61 IAI46_07380 ABC transporter permease 0.82 IAI46_20330 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM low > 86
Rahnella sp. WP5 0.57 EX31_RS23950 ABC transporter permease 0.79 EX31_RS13100 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM low > 89
Marinobacter adhaerens HP15 0.48 HP15_995 binding-protein-dependent transport systems inner membrane component 0.38 HP15_2104 putative RNA 2'-O-ribose methyltransferase low > 73

Not shown: 4 genomes with orthologs for IAI47_13315 only; 27 genomes with orthologs for IAI47_04035 only