Conservation of cofitness between IAI47_04015 and IAI47_03620 in Pantoea sp. MT58

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_04015 cysteine desulfurase CsdA 1.0 IAI47_03620 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.56 11
Escherichia coli ECOR38 0.74 HEPCGN_19360 csdA cysteine desulfurase CsdA 0.82 HEPCGN_18585 Ribosomal RNA small subunit methyltransferase E low > 85
Escherichia coli BW25113 0.74 b2810 csdA cysteine sulfinate desulfinase (NCBI) 0.82 b2946 yggJ orf, hypothetical protein (VIMSS) 0.29 22
Escherichia coli ECRC62 0.74 BNILDI_10490 csdA cysteine desulfurase CsdA 0.82 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli BL21 0.74 ECD_02661 cysteine sulfinate desulfinase 0.82 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent low > 60
Escherichia fergusonii Becca 0.73 EFB2_01107 Cysteine desulfurase CsdA 0.82 EFB2_00956 Ribosomal RNA small subunit methyltransferase E low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00921 Cysteine desulfurase CsdA 0.82 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E low > 73
Escherichia coli ECRC101 0.73 MCAODC_10630 csdA cysteine desulfurase CsdA 0.82 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC98 0.73 JDDGAC_23770 csdA cysteine desulfurase CsdA 0.82 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC99 0.73 KEDOAH_08025 csdA cysteine desulfurase CsdA 0.82 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC102 0.73 NIAGMN_17875 csdA cysteine desulfurase CsdA 0.82 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC101 0.73 OKFHMN_20105 csdA cysteine desulfurase CsdA 0.82 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS15660 cysteine desulfurase CsdA 0.82 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 52
Escherichia coli ECOR27 0.73 NOLOHH_11985 csdA cysteine desulfurase CsdA 0.82 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 57
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA 0.81 EX28DRAFT_2984 RNA methyltransferase, RsmE family low > 76
Serratia liquefaciens MT49 0.72 IAI46_20350 cysteine desulfurase CsdA 0.83 IAI46_21385 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 86
Klebsiella michiganensis M5al 0.72 BWI76_RS22965 cysteine sulfinate desulfinase 0.79 BWI76_RS24070 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 92
Rahnella sp. WP5 0.72 EX31_RS13120 cysteine desulfurase CsdA 0.80 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 89
Enterobacter sp. TBS_079 0.72 MPMX20_03673 Cysteine desulfurase CsdA 0.81 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E low > 85
Erwinia tracheiphila SCR3 0.71 LU632_RS06240 csdA cysteine desulfurase CsdA 0.84 LU632_RS05485 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 74
Pectobacterium carotovorum WPP14 0.70 HER17_RS16425 cysteine desulfurase CsdA 0.76 HER17_RS02640 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4867 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.80 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 78
Dickeya dadantii 3937 0.65 DDA3937_RS05040 cysteine desulfurase CsdA 0.79 DDA3937_RS18555 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.50 63
Dickeya dianthicola 67-19 0.65 HGI48_RS05045 cysteine desulfurase CsdA 0.76 HGI48_RS18490 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS05385 cysteine desulfurase CsdA 0.77 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_1335 Aminotransferase, class V 0.40 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_1335 Aminotransferase, class V 0.40 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase low > 86

Not shown: 0 genomes with orthologs for IAI47_04015 only; 73 genomes with orthologs for IAI47_03620 only