Conservation of cofitness between IAI46_20470 and IAI46_14305 in Serratia liquefaciens MT49

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_20470 YgdI/YgdR family lipoprotein 1.0 IAI46_14305 DNA topoisomerase III 0.42 19
Enterobacter sp. TBS_079 0.72 MPMX20_03695 putative lipoprotein YgdR 0.83 MPMX20_01853 DNA topoisomerase 3 0.21 3
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2907 Bacterial protein of unknown function (DUF903) 0.83 EX28DRAFT_1764 DNA topoisomerase III, bacteria and conjugative plasmid low > 76
Escherichia coli ECRC99 0.71 KEDOAH_08150 ygdR lipoprotein YgdR 0.85 KEDOAH_01280 topB DNA topoisomerase III — —
Escherichia coli ECOR38 0.71 HEPCGN_19235 ygdR lipoprotein YgdR 0.84 HEPCGN_05200 topB DNA topoisomerase III low > 85
Escherichia coli ECOR27 0.71 NOLOHH_11865 ygdR lipoprotein YgdR 0.85 NOLOHH_17340 topB DNA topoisomerase III low > 57
Escherichia coli Nissle 1917 0.71 ECOLIN_RS15905 lipoprotein YgdR 0.84 ECOLIN_RS09830 DNA topoisomerase III — —
Escherichia coli ECRC62 0.71 BNILDI_10345 ygdR lipoprotein YgdR 0.85 BNILDI_16125 topB DNA topoisomerase III — —
Escherichia coli BL21 0.71 ECD_02681 DUF903 family verified lipoprotein 0.85 ECD_01732 DNA topoisomerase III low > 60
Escherichia coli ECRC98 0.71 JDDGAC_23645 ygdR lipoprotein YgdR 0.85 JDDGAC_01405 topB DNA topoisomerase III — —
Escherichia coli ECRC101 0.71 MCAODC_10505 ygdR lipoprotein YgdR 0.85 MCAODC_18580 topB DNA topoisomerase III — —
Escherichia coli ECRC102 0.71 NIAGMN_17750 ygdR lipoprotein YgdR 0.85 NIAGMN_01235 topB DNA topoisomerase III — —
Escherichia coli ECRC101 0.71 OKFHMN_19980 ygdR lipoprotein YgdR 0.85 OKFHMN_26830 topB DNA topoisomerase III — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00896 putative lipoprotein YgdR 0.85 OHPLBJKB_01969 DNA topoisomerase 3 low > 73
Escherichia coli BW25113 0.71 b2833 ygdR hypothetical protein (NCBI) 0.85 b1763 topB DNA topoisomerase III (NCBI) low > 76
Escherichia fergusonii Becca 0.71 EFB2_01050 putative lipoprotein YgdR 0.84 EFB2_02231 DNA topoisomerase 3 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1316 Hypothetical lipoprotein ygdR precursor 0.84 GFF3486 DNA topoisomerase III (EC 5.99.1.2) low > 78
Klebsiella michiganensis M5al 0.69 BWI76_RS23300 YgdI/YgdR family lipoprotein 0.82 BWI76_RS11605 DNA topoisomerase III low > 92
Rahnella sp. WP5 0.68 EX31_RS13215 YgdI/YgdR family lipoprotein 0.88 EX31_RS06315 DNA topoisomerase III low > 89
Pectobacterium carotovorum WPP14 0.66 HER17_RS16600 YgdI/YgdR family lipoprotein 0.88 HER17_RS11095 DNA topoisomerase III low > 75
Erwinia tracheiphila SCR3 0.62 LU632_RS06085 YgdI/YgdR family lipoprotein 0.81 LU632_RS12960 DNA topoisomerase III low > 74
Pantoea sp. MT58 0.61 IAI47_03900 YgdI/YgdR family lipoprotein 0.80 IAI47_08980 DNA topoisomerase III low > 76
Dickeya dianthicola 67-19 0.58 HGI48_RS04940 YgdI/YgdR family lipoprotein 0.85 HGI48_RS10310 DNA topoisomerase III low > 71
Dickeya dianthicola ME23 0.58 DZA65_RS05275 YgdI/YgdR family lipoprotein 0.85 DZA65_RS10785 DNA topoisomerase III low > 75
Dickeya dadantii 3937 0.57 DDA3937_RS04930 YgdI/YgdR family lipoprotein 0.85 DDA3937_RS10300 DNA topoisomerase III low > 74
Shewanella oneidensis MR-1 0.40 SO0963 conserved hypothetical protein (NCBI ptt file) 0.54 SO3061 topB DNA topoisomerase III (NCBI ptt file) low > 76

Not shown: 1 genomes with orthologs for IAI46_20470 only; 32 genomes with orthologs for IAI46_14305 only