Conservation of cofitness between HSERO_RS15005 and HSERO_RS23720 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS15005 ribosomal protein S12 methylthiotransferase 1.0 HSERO_RS23720 histidine kinase 0.34 18
Hydrogenophaga sp. GW460-11-11-14-LB1 0.72 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.46 GFF612 Putative sensor-like histidine kinase YfhK low > 90
Variovorax sp. SCN45 0.71 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) 0.40 GFF7321 Sensor histidine kinase GlrK low > 127
Variovorax sp. OAS795 0.71 ABID97_RS17220 30S ribosomal protein S12 methylthiotransferase RimO 0.39 ABID97_RS06470 ATP-binding protein — —
Acidovorax sp. GW101-3H11 0.70 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.36 Ac3H11_4009 Putative sensor-like histidine kinase YfhK low > 79
Dechlorosoma suillum PS 0.67 Dsui_2540 ribosomal protein S12 methylthiotransferase RimO 0.30 Dsui_2358 signal transduction histidine kinase low > 51
Klebsiella michiganensis M5al 0.66 BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO 0.20 BWI76_RS21260 two-component sensor histidine kinase low > 92
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO 0.19 EX28DRAFT_0094 Signal transduction histidine kinase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO 0.19 MPMX20_03425 Sensor histidine kinase QseE low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.19 GFF2457 Putative sensor-like histidine kinase YfhK low > 78
Escherichia coli ECRC101 0.65 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli ECOR38 0.65 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO 0.20 OHPLBJKB_01151 Sensor histidine kinase GlrK low > 73
Escherichia coli Nissle 1917 0.65 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO 0.20 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli ECRC62 0.65 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Escherichia coli BW25113 0.65 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) 0.20 b2556 yfhK putative 2-component sensor protein (VIMSS) low > 76
Escherichia fergusonii Becca 0.65 EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO 0.20 EFB2_01340 Sensor histidine kinase QseE low > 86
Escherichia coli ECRC99 0.65 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli ECRC98 0.65 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK low > 86
Escherichia coli ECRC102 0.65 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli BL21 0.65 ECD_00802 ribosomal protein S12 methylthiotransferase 0.20 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR low > 61
Escherichia coli ECOR27 0.65 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Erwinia tracheiphila SCR3 0.65 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 LU632_RS17940 HAMP domain-containing histidine kinase low > 74
Pectobacterium carotovorum WPP14 0.65 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO 0.18 HER17_RS05915 HAMP domain-containing histidine kinase low > 75
Escherichia coli ECRC100 0.65 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK low > 80
Dickeya dadantii 3937 0.64 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO 0.20 DDA3937_RS15650 HAMP domain-containing histidine kinase 0.37 60
Dickeya dianthicola ME23 0.64 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO 0.19 DZA65_RS16825 HAMP domain-containing histidine kinase low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO 0.19 HGI48_RS15745 HAMP domain-containing histidine kinase low > 71
Alteromonas macleodii MIT1002 0.62 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO 0.13 MIT1002_01324 Sensor histidine kinase QseE low > 70

Not shown: 59 genomes with orthologs for HSERO_RS15005 only; 3 genomes with orthologs for HSERO_RS23720 only