Conservation of cofitness between HSERO_RS09035 and HSERO_RS17375 in Herbaspirillum seropedicae SmR1

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09035 lysine transporter LysE 1.0 HSERO_RS17375 SOS mutagenesis protein 0.23 10
Shewanella oneidensis MR-1 0.34 SO1716 transporter, LysE family (NCBI ptt file) 0.21 SOA0013 umuD umuD protein (VIMSS) low > 76
Pseudomonas sp. RS175 0.32 PFR28_02911 Cysteine/O-acetylserine efflux protein 0.30 PFR28_01191 Protein UmuD low > 88
Rahnella sp. WP5 0.32 EX31_RS05815 LysE family translocator 0.38 EX31_RS00810 translesion error-prone DNA polymerase V autoproteolytic subunit low > 89
Pantoea sp. MT58 0.29 IAI47_01990 LysE family translocator 0.34 IAI47_10590 translesion error-prone DNA polymerase V autoproteolytic subunit low > 76
Serratia liquefaciens MT49 0.28 IAI46_00170 LysE family translocator 0.34 IAI46_15985 translesion error-prone DNA polymerase V autoproteolytic subunit low > 86
Erwinia tracheiphila SCR3 0.27 LU632_RS22775 LysE family translocator 0.34 LU632_RS05345 umuD translesion error-prone DNA polymerase V autoproteolytic subunit — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_3331 Putative threonine efflux protein 0.33 EX28DRAFT_1554 Peptidase S24-like low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_01128 Cysteine/O-acetylserine efflux protein 0.33 OHPLBJKB_02506 Protein UmuD low > 73
Escherichia coli ECRC62 0.20 BNILDI_11825 eamB cysteine/O-acetylserine transporter 0.33 BNILDI_18920 umuD Protein UmuD low > 75
Escherichia coli BW25113 0.20 b2578 yfiK neutral amino-acid efflux system (NCBI) 0.33 b1183 umuD DNA polymerase V, subunit D (NCBI) low > 76
Escherichia coli ECOR27 0.20 NOLOHH_13020 eamB cysteine/O-acetylserine transporter 0.33 NOLOHH_20755 umuD Protein UmuD low > 75
Escherichia coli BL21 0.20 ECD_02472 cysteine and O-acetylserine exporter 0.33 ECD_01158 translesion error-prone DNA polymerase V subunit; RecA-activated auto-protease — —
Escherichia fergusonii Becca 0.20 EFB2_01318 Cysteine/O-acetylserine efflux protein 0.33 EFB2_02749 Protein UmuD low > 86
Escherichia coli Nissle 1917 0.20 ECOLIN_RS14590 cysteine/O-acetylserine transporter 0.34 ECOLIN_RS07155 translesion error-prone DNA polymerase V autoproteolytic subunit — —
Escherichia coli ECOR38 0.20 HEPCGN_20475 eamB cysteine/O-acetylserine transporter 0.33 HEPCGN_24720 umuD Protein UmuD low > 87
Escherichia coli ECRC102 0.19 NIAGMN_19120 eamB cysteine/O-acetylserine transporter 0.33 NIAGMN_27960 umuD Protein UmuD — —
Escherichia coli ECRC99 0.19 KEDOAH_06870 eamB cysteine/O-acetylserine transporter 0.33 KEDOAH_25275 umuD Protein UmuD — —
Escherichia coli ECRC101 0.19 MCAODC_11880 eamB cysteine/O-acetylserine transporter 0.33 MCAODC_21910 umuD Protein UmuD low > 87
Escherichia coli ECRC100 0.19 OKFHMN_21350 eamB cysteine/O-acetylserine transporter 0.33 OKFHMN_28260 umuD Protein UmuD low > 80
Escherichia coli ECRC98 0.19 JDDGAC_25015 eamB cysteine/O-acetylserine transporter 0.33 JDDGAC_06250 umuD Protein UmuD low > 86
Rhodanobacter denitrificans MT42 0.15 LRK55_RS14350 LysE family translocator 0.27 LRK55_RS18260 translesion error-prone DNA polymerase V autoproteolytic subunit low > 63

Not shown: 38 genomes with orthologs for HSERO_RS09035 only; 6 genomes with orthologs for HSERO_RS17375 only