Conservation of cofitness between HSERO_RS23720 and HSERO_RS12550 in Herbaspirillum seropedicae SmR1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23720 histidine kinase 1.0 HSERO_RS12550 D-lactate dehydrogenase 0.44 17
Rahnella sp. WP5 0.22 EX31_RS20625 HAMP domain-containing histidine kinase 0.47 EX31_RS06470 2-hydroxyacid dehydrogenase low > 89
Serratia liquefaciens MT49 0.22 IAI46_19470 HAMP domain-containing histidine kinase 0.48 IAI46_13355 2-hydroxyacid dehydrogenase low > 86
Pantoea sp. MT58 0.21 IAI47_04935 HAMP domain-containing histidine kinase 0.47 IAI47_09495 2-hydroxyacid dehydrogenase low > 76
Escherichia coli BL21 0.20 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR 0.47 ECD_01352 fermentative D-lactate dehydrogenase, NAD-dependent low > 61
Escherichia coli ECOR38 0.20 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK 0.47 HEPCGN_26050 ldhA D-lactate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.20 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK 0.47 ECOLIN_RS08110 D-lactate dehydrogenase low > 55
Escherichia coli ECOR27 0.20 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK 0.47 NOLOHH_19530 ldhA D-lactate dehydrogenase low > 75
Escherichia coli BW25113 0.20 b2556 yfhK putative 2-component sensor protein (VIMSS) 0.47 b1380 ldhA D-lactate dehydrogenase (NCBI) low > 76
Klebsiella michiganensis M5al 0.20 BWI76_RS21260 two-component sensor histidine kinase 0.47 BWI76_RS12790 lactate dehydrogenase low > 92
Escherichia fergusonii Becca 0.20 EFB2_01340 Sensor histidine kinase QseE 0.47 EFB2_02576 D-lactate dehydrogenase low > 86
Escherichia coli ECRC102 0.20 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK 0.47 NIAGMN_25930 ldhA D-lactate dehydrogenase — —
Escherichia coli ECRC99 0.20 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK 0.47 KEDOAH_26640 ldhA D-lactate dehydrogenase — —
Escherichia coli ECRC101 0.20 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK 0.47 MCAODC_16140 ldhA D-lactate dehydrogenase low > 87
Escherichia coli ECRC100 0.20 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK 0.47 OKFHMN_01795 ldhA D-lactate dehydrogenase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_01151 Sensor histidine kinase GlrK 0.47 OHPLBJKB_02331 D-lactate dehydrogenase low > 73
Escherichia coli ECRC62 0.20 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK 0.47 BNILDI_17985 ldhA D-lactate dehydrogenase low > 75
Escherichia coli ECRC98 0.20 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK 0.47 JDDGAC_04285 ldhA D-lactate dehydrogenase low > 86
Dickeya dadantii 3937 0.20 DDA3937_RS15650 HAMP domain-containing histidine kinase 0.47 DDA3937_RS12295 2-hydroxyacid dehydrogenase low > 74
Enterobacter asburiae PDN3 0.19 EX28DRAFT_0094 Signal transduction histidine kinase 0.47 EX28DRAFT_1435 Lactate dehydrogenase and related dehydrogenases 0.66 50
Enterobacter sp. TBS_079 0.19 MPMX20_03425 Sensor histidine kinase QseE 0.47 MPMX20_02132 D-lactate dehydrogenase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF2457 Putative sensor-like histidine kinase YfhK 0.47 GFF2638 D-lactate dehydrogenase (EC 1.1.1.28) low > 78
Pectobacterium carotovorum WPP14 0.18 HER17_RS05915 HAMP domain-containing histidine kinase 0.45 HER17_RS09630 2-hydroxyacid dehydrogenase low > 75
Alteromonas macleodii MIT1002 0.13 MIT1002_01324 Sensor histidine kinase QseE 0.45 MIT1002_01974 D-lactate dehydrogenase low > 70

Not shown: 8 genomes with orthologs for HSERO_RS23720 only; 40 genomes with orthologs for HSERO_RS12550 only