Conservation of cofitness between HGI48_RS20690 and HGI48_RS17345 in Dickeya dianthicola 67-19

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS20690 L(+)-tartrate dehydratase subunit alpha 1.0 HGI48_RS17345 YggS family pyridoxal phosphate-dependent enzyme 0.42 19
Magnetospirillum magneticum AMB-1 0.76 AMB_RS16035 L(+)-tartrate dehydratase subunit alpha 0.28 AMB_RS00120 YggS family pyridoxal phosphate-dependent enzyme low > 64
Acidovorax sp. GW101-3H11 0.72 Ac3H11_639 L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32) 0.47 Ac3H11_4474 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF2153 L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32) 0.67 GFF3054 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC low > 78
Klebsiella michiganensis M5al 0.65 BWI76_RS25400 L(+)-tartrate dehydratase subunit alpha 0.69 BWI76_RS24100 YggS family pyridoxal phosphate enzyme low > 92
Escherichia coli Nissle 1917 0.61 ECOLIN_RS17675 L(+)-tartrate dehydratase subunit alpha 0.69 ECOLIN_RS16415 pyridoxal phosphate homeostasis protein low > 55
Escherichia fergusonii Becca 0.61 EFB2_00750 L(+)-tartrate dehydratase subunit alpha 0.69 EFB2_00951 Pyridoxal phosphate homeostasis protein low > 86
Escherichia coli ECRC62 0.61 BNILDI_01040 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 BNILDI_09705 yggS pyridoxal phosphate homeostasis protein low > 75
Escherichia coli BL21 0.61 ECD_02931 L-tartrate dehydratase, alpha subunit 0.69 ECD_02781 UPF0001 family protein, PLP-binding low > 61
Escherichia coli BW25113 0.61 b3061 ttdA tartrate dehydratase (NCBI) 0.69 b2951 yggS predicted enzyme (NCBI) low > 76
Escherichia coli ECOR27 0.61 NOLOHH_10475 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 NOLOHH_11125 yggS pyridoxal phosphate homeostasis protein low > 75
Escherichia coli ECOR38 0.61 HEPCGN_17540 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 HEPCGN_18560 yggS pyridoxal phosphate homeostasis protein 0.65 80
Escherichia coli ECRC98 0.61 JDDGAC_22320 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 JDDGAC_22885 yggS pyridoxal phosphate homeostasis protein low > 86
Escherichia coli ECRC99 0.61 KEDOAH_09460 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 KEDOAH_08885 yggS pyridoxal phosphate homeostasis protein — —
Escherichia coli ECRC101 0.61 MCAODC_09200 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 MCAODC_09775 yggS pyridoxal phosphate homeostasis protein low > 87
Escherichia coli ECRC100 0.61 OKFHMN_18685 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 OKFHMN_19255 yggS pyridoxal phosphate homeostasis protein low > 80
Escherichia coli ECRC102 0.61 NIAGMN_16450 ttdA L(+)-tartrate dehydratase subunit alpha 0.69 NIAGMN_17020 yggS pyridoxal phosphate homeostasis protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_00641 L(+)-tartrate dehydratase subunit alpha 0.69 OHPLBJKB_00765 Pyridoxal phosphate homeostasis protein low > 73
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS02195 fumarate hydratase 0.47 RR42_RS17355 hypothetical protein low > 128
Desulfovibrio vulgaris Miyazaki F 0.22 DvMF_2461 fumarate hydratase (RefSeq) 0.30 DvMF_2208 alanine racemase domain protein (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU3264 tartrate dehydratase alpha subunit, putative (TIGR) 0.30 DVU0051 conserved hypothetical protein TIGR00044 (TIGR) low > 55
Variovorax sp. SCN45 0.18 GFF1584 Fumarate hydratase class I, alpha region (EC 4.2.1.2); L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32) 0.47 GFF3744 Pyridoxal phosphate-containing protein YggS — —

Not shown: 2 genomes with orthologs for HGI48_RS20690 only; 80 genomes with orthologs for HGI48_RS17345 only