Conservation of cofitness between HGI48_RS04665 and HGI48_RS03350 in Dickeya dianthicola 67-19

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS04665 helix-turn-helix transcriptional regulator 1.0 HGI48_RS03350 LysR family transcriptional regulator 0.43 17
Dickeya dianthicola ME23 1.00 DZA65_RS04605 helix-turn-helix transcriptional regulator 0.98 DZA65_RS03395 LysR family transcriptional regulator low > 75
Dickeya dadantii 3937 0.96 DDA3937_RS04740 helix-turn-helix transcriptional regulator 0.93 DDA3937_RS03200 LysR family transcriptional regulator low > 74
Escherichia fergusonii Becca 0.59 EFB2_04316 hypothetical protein 0.36 EFB2_00287 HTH-type transcriptional regulator DmlR low > 86
Escherichia coli ECRC101 0.59 MCAODC_02565 ytfH Uncharacterized HTH-type transcriptional regulator YtfH 0.36 MCAODC_06745 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 87
Escherichia coli BL21 0.59 ECD_04084 DUF24 family HxlR-type putative transcriptional regulator 0.35 ECD_03369 LysR family putative transcriptional regulator low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03821 hypothetical protein 0.36 OHPLBJKB_00181 HTH-type transcriptional regulator DmlR low > 73
Escherichia coli ECRC102 0.59 NIAGMN_09900 ytfH Uncharacterized HTH-type transcriptional regulator YtfH 0.36 NIAGMN_13995 yhjC Uncharacterized HTH-type transcriptional regulator YhjC — —
Escherichia coli ECRC62 0.59 BNILDI_07210 ytfH Uncharacterized HTH-type transcriptional regulator YtfH 0.36 BNILDI_03360 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 75
Escherichia coli ECRC100 0.59 OKFHMN_12050 ytfH Uncharacterized HTH-type transcriptional regulator YtfH 0.36 OKFHMN_16230 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 80
Escherichia coli BW25113 0.59 b4212 ytfH orf, hypothetical protein (VIMSS) 0.35 b3521 yhjC predicted DNA-binding transcriptional regulator (RefSeq) low > 76
Escherichia coli ECOR27 0.59 NOLOHH_04310 ytfH Uncharacterized HTH-type transcriptional regulator YtfH 0.36 NOLOHH_08195 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 75
Escherichia coli ECRC99 0.59 KEDOAH_16105 ytfH Uncharacterized HTH-type transcriptional regulator YtfH 0.36 KEDOAH_11915 yhjC Uncharacterized HTH-type transcriptional regulator YhjC — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS24470 helix-turn-helix domain-containing protein 0.36 ECOLIN_RS20140 LysR family transcriptional regulator low > 55
Enterobacter sp. TBS_079 0.58 MPMX20_00490 hypothetical protein 0.43 MPMX20_04406 HTH-type transcriptional regulator PgrR low > 85
Klebsiella michiganensis M5al 0.58 BWI76_RS02725 HxlR family transcriptional regulator 0.42 BWI76_RS26725 LysR family transcriptional regulator low > 92
Escherichia coli ECOR38 0.58 HEPCGN_10245 hxlR transcriptional regulator 0.35 HEPCGN_15135 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 87
Escherichia coli ECRC98 0.58 JDDGAC_15690 hxlR transcriptional regulator 0.36 JDDGAC_19860 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 86
Pantoea sp. MT58 0.57 IAI47_03465 helix-turn-helix transcriptional regulator 0.41 IAI47_21090 LysR family transcriptional regulator low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF865 Redox-sensing transcriptional regulator QorR 0.38 GFF2673 Probable transcription regulator protein of MDR efflux pump cluster low > 78
Rahnella sp. WP5 0.57 EX31_RS02235 helix-turn-helix transcriptional regulator 0.58 EX31_RS04130 LysR family transcriptional regulator low > 89
Enterobacter asburiae PDN3 0.56 EX28DRAFT_3399 transcriptional regulator, HxlR family 0.44 EX28DRAFT_4056 Transcriptional regulator low > 76
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS21495 helix-turn-helix domain-containing protein 0.44 ABZR87_RS19415 LysR family transcriptional regulator low > 80

Not shown: 3 genomes with orthologs for HGI48_RS04665 only; 36 genomes with orthologs for HGI48_RS03350 only