Conservation of cofitness between HER17_RS11645 and HER17_RS17230 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11645 two-component system sensor histidine kinase PhoQ 1.0 HER17_RS17230 Dyp-type peroxidase 0.90 17
Dickeya dadantii 3937 0.77 DDA3937_RS11505 two-component system sensor histidine kinase PhoQ 0.88 DDA3937_RS04420 Dyp-type peroxidase 0.55 24
Dickeya dianthicola 67-19 0.76 HGI48_RS11550 two-component system sensor histidine kinase PhoQ 0.88 HGI48_RS04395 Dyp-type peroxidase low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS11885 two-component system sensor histidine kinase PhoQ 0.88 DZA65_RS04310 Dyp-type peroxidase low > 75
Serratia liquefaciens MT49 0.68 IAI46_10390 two-component system sensor histidine kinase PhoQ 0.81 IAI46_18515 Dyp-type peroxidase low > 86
Rahnella sp. WP5 0.67 EX31_RS24555 two-component system sensor histidine kinase PhoQ 0.74 EX31_RS20230 Dyp-type peroxidase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3414 Sensor protein PhoQ (EC 2.7.13.3) 0.68 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup low > 78
Escherichia coli BL21 0.61 ECD_01127 sensory histidine kinase in two-component regulatory system with PhoP 0.68 ECD_02331 porphyrinogen oxidase, cytoplasmic — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02539 Sensor protein PhoQ 0.68 OHPLBJKB_01291 putative deferrochelatase/peroxidase YfeX low > 73
Escherichia coli ECOR38 0.61 HEPCGN_24195 phoQ two-component system sensor histidine kinase PhoQ 0.68 HEPCGN_21295 yfeX porphyrinogen peroxidase low > 87
Escherichia coli BW25113 0.61 b1129 phoQ sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) 0.67 b2431 b2431 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.61 NOLOHH_20920 phoQ two-component system sensor histidine kinase PhoQ 0.68 NOLOHH_13800 yfeX porphyrinogen peroxidase low > 75
Escherichia coli Nissle 1917 0.61 ECOLIN_RS06605 two-component system sensor histidine kinase PhoQ 0.68 ECOLIN_RS13940 porphyrinogen peroxidase low > 55
Escherichia coli ECRC62 0.61 BNILDI_19085 phoQ two-component system sensor histidine kinase PhoQ 0.68 BNILDI_12665 yfeX porphyrinogen peroxidase low > 75
Escherichia fergusonii Becca 0.61 EFB2_02846 Sensor protein PhoQ 0.68 EFB2_01448 Dye-decolorizing peroxidase YfeX low > 86
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1801 Signal transduction histidine kinase 0.69 EX28DRAFT_0204 Dyp-type peroxidase family low > 76
Escherichia coli ECRC102 0.61 NIAGMN_24870 phoQ two-component system sensor histidine kinase PhoQ 0.68 NIAGMN_19890 yfeX porphyrinogen peroxidase — —
Escherichia coli ECRC99 0.61 KEDOAH_24810 phoQ two-component system sensor histidine kinase PhoQ 0.68 KEDOAH_06100 yfeX porphyrinogen peroxidase — —
Escherichia coli ECRC101 0.61 MCAODC_22360 phoQ two-component system sensor histidine kinase PhoQ 0.68 MCAODC_12650 yfeX porphyrinogen peroxidase low > 87
Escherichia coli ECRC98 0.61 JDDGAC_06640 phoQ two-component system sensor histidine kinase PhoQ 0.68 JDDGAC_26070 yfeX porphyrinogen peroxidase low > 86
Escherichia coli ECRC100 0.61 OKFHMN_00725 phoQ two-component system sensor histidine kinase PhoQ 0.68 OKFHMN_22120 yfeX porphyrinogen peroxidase low > 80
Klebsiella michiganensis M5al 0.60 BWI76_RS11275 sensor protein PhoQ 0.66 BWI76_RS20710 dyp-type peroxidase family protein low > 92
Enterobacter sp. TBS_079 0.60 MPMX20_01810 Virulence sensor histidine kinase PhoQ 0.69 MPMX20_03318 Dye-decolorizing peroxidase YfeX 0.29 24
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3484 Sensor protein PhoQ (EC 2.7.13.3) 0.19 Pf1N1B4_5683 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup — —
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_2012 Sensor protein PhoQ (EC 2.7.13.3) 0.19 PfGW456L13_2809 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup — —
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_02810 histidine kinase 0.29 AO353_25350 peroxidase low > 101
Pseudomonas simiae WCS417 0.18 PS417_21510 histidine kinase 0.28 PS417_11115 peroxidase low > 88

Not shown: 9 genomes with orthologs for HER17_RS11645 only; 16 genomes with orthologs for HER17_RS17230 only