Conservation of cofitness between HER17_RS12165 and HER17_RS12170 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12165 citrate lyase subunit alpha 1.0 HER17_RS12170 citrate (pro-3S)-lyase subunit beta 0.84 2
Dickeya dadantii 3937 0.88 DDA3937_RS09790 citrate lyase subunit alpha 0.94 DDA3937_RS07835 citrate (pro-3S)-lyase subunit beta — —
Dickeya dianthicola ME23 0.87 DZA65_RS10115 citrate lyase subunit alpha 0.94 DZA65_RS10110 citrate (pro-3S)-lyase subunit beta 0.35 60
Dickeya dianthicola 67-19 0.87 HGI48_RS09805 citrate lyase subunit alpha 0.94 HGI48_RS09800 citrate (pro-3S)-lyase subunit beta low > 71
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3004 citrate lyase, alpha subunit 0.87 EX28DRAFT_3005 citrate lyase, beta subunit low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03824 Citrate lyase alpha chain 0.87 MPMX20_03825 Citrate lyase subunit beta 0.34 3
Rahnella sp. WP5 0.78 EX31_RS17800 citrate lyase subunit alpha 0.87 EX31_RS17795 citrate (pro-3S)-lyase subunit beta low > 89
Azospirillum sp. SherDot2 0.70 MPMX19_03125 Citrate lyase alpha chain 0.83 MPMX19_03124 Citrate lyase subunit beta low > 112
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF219 Citrate lyase alpha chain (EC 4.1.3.6) 0.72 GFF220 Citrate lyase beta chain (EC 4.1.3.6) low > 78
Klebsiella michiganensis M5al 0.68 BWI76_RS04450 citrate lyase subunit alpha 0.71 BWI76_RS04445 citrate (pro-3S)-lyase subunit beta low > 92
Escherichia coli ECOR27 0.66 NOLOHH_23835 citF citrate lyase subunit alpha 0.65 NOLOHH_23830 citE citrate lyase subunit beta low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03090 Citrate lyase alpha chain 0.66 OHPLBJKB_03089 Citrate lyase subunit beta low > 73
Escherichia coli ECRC62 0.66 BNILDI_21845 citF citrate lyase subunit alpha 0.66 BNILDI_21840 citE citrate (pro-3S)-lyase subunit beta low > 75
Escherichia coli BL21 0.66 ECD_00583 citrate lyase, citrate-ACP transferase (alpha) subunit 0.66 ECD_00584 citrate lyase, citryl-ACP lyase (beta) subunit low > 61
Escherichia coli BW25113 0.66 b0615 citF citrate lyase, citrate-ACP transferase (alpha) subunit (NCBI) 0.66 b0616 citE citrate lyase beta chain (acyl lyase subunit) (VIMSS) low > 76
Escherichia fergusonii Becca 0.66 EFB2_03476 Citrate lyase alpha chain 0.66 EFB2_03475 Citrate lyase subunit beta low > 86
Escherichia coli Nissle 1917 0.66 ECOLIN_RS03360 citrate lyase subunit alpha 0.66 ECOLIN_RS03365 citrate (pro-3S)-lyase subunit beta — —
Escherichia coli ECOR38 0.66 HEPCGN_00815 citF citrate lyase subunit alpha 0.66 HEPCGN_00820 citE citrate (pro-3S)-lyase subunit beta low > 87
Escherichia coli ECRC98 0.66 JDDGAC_11105 citF citrate lyase subunit alpha 0.66 JDDGAC_11100 citE citrate (pro-3S)-lyase subunit beta low > 86
Escherichia coli ECRC100 0.66 OKFHMN_07460 citF citrate lyase subunit alpha 0.66 OKFHMN_07455 citE citrate (pro-3S)-lyase subunit beta low > 80
Escherichia coli ECRC102 0.66 NIAGMN_05515 citF citrate lyase subunit alpha 0.65 NIAGMN_05510 citE citrate lyase subunit beta — —
Escherichia coli ECRC99 0.66 KEDOAH_20510 citF citrate lyase subunit alpha 0.66 KEDOAH_20515 citE citrate (pro-3S)-lyase subunit beta — —
Escherichia coli ECRC101 0.66 MCAODC_26675 citF citrate lyase subunit alpha 0.66 MCAODC_26670 citE citrate (pro-3S)-lyase subunit beta low > 87
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_04130 citrate lyase subunit alpha 0.67 CSW01_04125 citrate (pro-3S)-lyase subunit beta low > 62
Serratia liquefaciens MT49 0.63 IAI46_16990 citrate lyase subunit alpha 0.64 IAI46_16995 citrate (pro-3S)-lyase subunit beta low > 86
Fusobacterium nucleatum SB010 0.51 HUW76_08615 citrate lyase subunit alpha 0.51 HUW76_08610 citrate (pro-3S)-lyase subunit beta low > 35
Dinoroseobacter shibae DFL-12 0.28 Dshi_1427 Citrate CoA-transferase (RefSeq) 0.22 Dshi_2874 Citrate (pro-3S)-lyase (RefSeq) low > 64

Not shown: 0 genomes with orthologs for HER17_RS12165 only; 22 genomes with orthologs for HER17_RS12170 only