Conservation of cofitness between HER17_RS11655 and HER17_RS11980 in Pectobacterium carotovorum WPP14

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11655 peptidase T 1.0 HER17_RS11980 membrane integrity-associated transporter subunit PqiA 0.77 3
Dickeya dianthicola 67-19 0.87 HGI48_RS11560 peptidase T 0.71 HGI48_RS12900 membrane integrity-associated transporter subunit PqiA low > 71
Dickeya dianthicola ME23 0.87 DZA65_RS11895 peptidase T 0.71 DZA65_RS13365 membrane integrity-associated transporter subunit PqiA low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS11515 peptidase T 0.71 DDA3937_RS12830 membrane integrity-associated transporter subunit PqiA low > 74
Serratia liquefaciens MT49 0.82 IAI46_10375 peptidase T 0.75 IAI46_08830 membrane integrity-associated transporter subunit PqiA low > 86
Rahnella sp. WP5 0.80 EX31_RS24545 peptidase T 0.68 EX31_RS18070 membrane integrity-associated transporter subunit PqiA low > 89
Escherichia coli BW25113 0.80 b1127 pepT peptidase T (NCBI) 0.66 b0950 pqiA paraquat-inducible membrane protein A (NCBI) low > 76
Escherichia coli ECRC101 0.80 MCAODC_22455 pepT peptidase T 0.66 MCAODC_24660 pqiA membrane integrity-associated transporter subunit PqiA low > 87
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06495 peptidase T 0.66 ECOLIN_RS04990 membrane integrity-associated transporter subunit PqiA low > 55
Escherichia coli ECOR38 0.80 HEPCGN_24080 pepT peptidase T 0.66 HEPCGN_23250 pqiA membrane integrity-associated transporter subunit PqiA 0.63 2
Escherichia fergusonii Becca 0.80 EFB2_02848 Peptidase T 0.66 EFB2_03121 Intermembrane transport protein PqiA low > 86
Escherichia coli ECRC98 0.80 JDDGAC_06735 pepT peptidase T 0.66 JDDGAC_08880 pqiA membrane integrity-associated transporter subunit PqiA low > 86
Escherichia coli ECOR27 0.80 NOLOHH_20930 pepT peptidase T 0.66 NOLOHH_21825 pqiA membrane integrity-associated transporter subunit PqiA low > 75
Escherichia coli ECRC100 0.80 OKFHMN_00630 pepT peptidase T 0.66 OKFHMN_05270 pqiA membrane integrity-associated transporter subunit PqiA low > 80
Escherichia coli ECRC102 0.80 NIAGMN_24755 pepT peptidase T 0.66 NIAGMN_02990 pqiA membrane integrity-associated transporter subunit PqiA — —
Escherichia coli ECRC99 0.80 KEDOAH_24715 pepT peptidase T 0.66 KEDOAH_22465 pqiA membrane integrity-associated transporter subunit PqiA — —
Escherichia coli ECRC62 0.80 BNILDI_19095 pepT peptidase T 0.66 BNILDI_19990 pqiA membrane integrity-associated transporter subunit PqiA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02541 Peptidase T 0.66 OHPLBJKB_02716 Paraquat-inducible protein A low > 73
Escherichia coli BL21 0.80 ECD_01125 peptidase T 0.66 ECD_00954 paraquat-inducible, SoxRS-regulated inner membrane protein low > 61
Enterobacter asburiae PDN3 0.79 EX28DRAFT_1803 peptidase T 0.65 EX28DRAFT_1993 integral membrane protein, PqiA family low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_01808 Peptidase T 0.65 MPMX20_01601 Intermembrane transport protein PqiA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3411 Tripeptide aminopeptidase (EC 3.4.11.4) 0.67 GFF3241 Paraquat-inducible protein A low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS11265 peptidase T 0.69 BWI76_RS09935 paraquat-inducible membrane protein A low > 92
Pantoea sp. MT58 0.72 IAI47_11945 peptidase T 0.65 IAI47_12680 membrane integrity-associated transporter subunit PqiA low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS14605 pepT peptidase T 0.64 LU632_RS09975 pqiA membrane integrity-associated transporter subunit PqiA low > 74
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_14890 peptidase T 0.35 CSW01_08795 paraquat-inducible protein A low > 62

Not shown: 12 genomes with orthologs for HER17_RS11655 only; 7 genomes with orthologs for HER17_RS11980 only