Conservation of cofitness between HER17_RS06010 and HER17_RS11050 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS06010 Fe-S cluster assembly transcriptional regulator IscR 1.0 HER17_RS11050 two-component system response regulator RssB 0.68 12
Dickeya dianthicola ME23 0.94 DZA65_RS16725 Fe-S cluster assembly transcriptional regulator IscR 0.75 DZA65_RS10825 two-component system response regulator RssB low > 75
Dickeya dianthicola 67-19 0.94 HGI48_RS15650 Fe-S cluster assembly transcriptional regulator IscR 0.75 HGI48_RS10350 two-component system response regulator RssB — —
Serratia liquefaciens MT49 0.92 IAI46_19360 Fe-S cluster assembly transcriptional regulator IscR 0.63 IAI46_14250 two-component system response regulator RssB 0.50 37
Rahnella sp. WP5 0.88 EX31_RS20550 Fe-S cluster assembly transcriptional regulator IscR 0.64 EX31_RS10100 two-component system response regulator RssB low > 89
Erwinia tracheiphila SCR3 0.86 LU632_RS17875 iscR Fe-S cluster assembly transcriptional regulator IscR 0.63 LU632_RS12925 rssB two-component system response regulator RssB low > 74
Pantoea sp. MT58 0.82 IAI47_05000 Fe-S cluster assembly transcriptional regulator IscR 0.62 IAI47_09025 two-component system response regulator RssB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2436 Iron-sulfur cluster regulator IscR 0.61 GFF2753 Hnr protein 0.75 17
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01178 HTH-type transcriptional regulator IscR 0.62 OHPLBJKB_02450 Regulator of RpoS low > 73
Enterobacter sp. TBS_079 0.71 MPMX20_03412 HTH-type transcriptional regulator IscR 0.61 MPMX20_02593 Regulator of RpoS low > 85
Escherichia coli ECOR38 0.71 HEPCGN_20755 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 HEPCGN_25045 rssB two-component system response regulator RssB low > 87
Escherichia coli ECRC98 0.71 JDDGAC_25290 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 JDDGAC_05990 rssB two-component system response regulator RssB low > 86
Escherichia coli ECRC99 0.71 KEDOAH_06605 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 KEDOAH_25580 rssB two-component system response regulator RssB — —
Escherichia coli ECRC100 0.71 OKFHMN_21615 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 OKFHMN_28585 rssB two-component system response regulator RssB low > 80
Escherichia fergusonii Becca 0.71 EFB2_01359 HTH-type transcriptional regulator IscR 0.62 EFB2_02691 Regulator of RpoS low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS14370 Fe-S cluster assembly transcriptional regulator IscR 0.62 ECOLIN_RS07475 two-component system response regulator RssB — —
Escherichia coli BL21 0.71 ECD_02423 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor 0.62 ECD_01211 PcnB-degradosome interaction factor; response regulator low > 61
Escherichia coli BW25113 0.71 b2531 iscR DNA-binding transcriptional repressor (NCBI) 0.62 b1235 rssB response regulator of RpoS (NCBI) low > 76
Escherichia coli ECRC102 0.71 NIAGMN_19385 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 NIAGMN_27650 rssB two-component system response regulator RssB — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0108 transcriptional regulator, BadM/Rrf2 family 0.61 EX28DRAFT_0861 Response regulator receiver domain low > 76
Escherichia coli ECRC62 0.71 BNILDI_12085 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 BNILDI_18620 rssB two-component system response regulator RssB low > 75
Escherichia coli ECRC101 0.71 MCAODC_12145 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 MCAODC_21675 rssB two-component system response regulator RssB low > 87
Escherichia coli ECOR27 0.71 NOLOHH_13285 iscR Fe-S cluster assembly transcriptional regulator IscR 0.62 NOLOHH_20465 rssB two-component system response regulator RssB low > 75
Klebsiella michiganensis M5al 0.70 BWI76_RS21165 Fe-S cluster assembly transcriptional regulator IscR 0.61 BWI76_RS17275 two-component system response regulator RssB low > 92
Pseudomonas sp. S08-1 0.61 OH686_17470 iron-sulfur cluster assembly transcription factor IscR 0.16 OH686_22730 Serine phosphatase RsbU, regulator of sigma subunit — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.15 Psyr_1912 Response regulator receiver:Stage II sporulation E — —
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.15 Psyr_1912 Response regulator receiver:Stage II sporulation E — —

Not shown: 36 genomes with orthologs for HER17_RS06010 only; 1 genomes with orthologs for HER17_RS11050 only