Conservation of cofitness between HER17_RS11980 and HER17_RS09270 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11980 membrane integrity-associated transporter subunit PqiA 1.0 HER17_RS09270 transcriptional regulator SlyA 0.78 10
Serratia liquefaciens MT49 0.75 IAI46_08830 membrane integrity-associated transporter subunit PqiA 0.73 IAI46_11340 transcriptional regulator SlyA low > 86
Dickeya dadantii 3937 0.71 DDA3937_RS12830 membrane integrity-associated transporter subunit PqiA 0.88 DDA3937_RS12595 transcriptional regulator SlyA low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS13365 membrane integrity-associated transporter subunit PqiA 0.88 DZA65_RS13105 transcriptional regulator SlyA low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS12900 membrane integrity-associated transporter subunit PqiA 0.88 HGI48_RS12650 transcriptional regulator SlyA low > 71
Klebsiella michiganensis M5al 0.69 BWI76_RS09935 paraquat-inducible membrane protein A 0.72 BWI76_RS16435 SlyA family transcriptional regulator — —
Rahnella sp. WP5 0.68 EX31_RS18070 membrane integrity-associated transporter subunit PqiA 0.70 EX31_RS13775 transcriptional regulator SlyA low > 89
Escherichia coli Nissle 1917 0.66 ECOLIN_RS04990 membrane integrity-associated transporter subunit PqiA 0.74 ECOLIN_RS09160 transcriptional regulator SlyA — —
Escherichia fergusonii Becca 0.66 EFB2_03121 Intermembrane transport protein PqiA 0.73 EFB2_02350 Transcriptional regulator SlyA low > 86
Escherichia coli BL21 0.66 ECD_00954 paraquat-inducible, SoxRS-regulated inner membrane protein 0.74 ECD_01612 global transcriptional regulator — —
Escherichia coli ECRC62 0.66 BNILDI_19990 pqiA membrane integrity-associated transporter subunit PqiA 0.73 BNILDI_16785 slyA transcriptional regulator SlyA low > 75
Escherichia coli BW25113 0.66 b0950 pqiA paraquat-inducible membrane protein A (NCBI) 0.74 b1642 slyA transcriptional regulator for cryptic hemolysin (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_02716 Paraquat-inducible protein A 0.74 OHPLBJKB_02083 Transcriptional regulator SlyA low > 73
Escherichia coli ECOR27 0.66 NOLOHH_21825 pqiA membrane integrity-associated transporter subunit PqiA 0.73 NOLOHH_17995 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC99 0.66 KEDOAH_22465 pqiA membrane integrity-associated transporter subunit PqiA 0.73 KEDOAH_00630 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC100 0.66 OKFHMN_05270 pqiA membrane integrity-associated transporter subunit PqiA 0.73 OKFHMN_27475 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC102 0.66 NIAGMN_02990 pqiA membrane integrity-associated transporter subunit PqiA 0.73 NIAGMN_00590 slyA transcriptional regulator SlyA — —
Escherichia coli ECOR38 0.66 HEPCGN_23250 pqiA membrane integrity-associated transporter subunit PqiA 0.72 HEPCGN_05860 slyA transcriptional regulator SlyA low > 87
Escherichia coli ECRC98 0.66 JDDGAC_08880 pqiA membrane integrity-associated transporter subunit PqiA 0.73 JDDGAC_02065 slyA transcriptional regulator SlyA low > 86
Escherichia coli ECRC101 0.66 MCAODC_24660 pqiA membrane integrity-associated transporter subunit PqiA 0.73 MCAODC_17935 slyA transcriptional regulator SlyA low > 87
Enterobacter sp. TBS_079 0.65 MPMX20_01601 Intermembrane transport protein PqiA 0.73 MPMX20_01995 Transcriptional regulator SlyA low > 85
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1993 integral membrane protein, PqiA family 0.73 EX28DRAFT_1639 Transcriptional regulators — —
Pantoea sp. MT58 0.65 IAI47_12680 membrane integrity-associated transporter subunit PqiA 0.74 IAI47_10720 transcriptional regulator SlyA low > 76
Erwinia tracheiphila SCR3 0.64 LU632_RS09975 pqiA membrane integrity-associated transporter subunit PqiA 0.70 LU632_RS11240 slyA transcriptional regulator SlyA — —
Shewanella sp. ANA-3 0.31 Shewana3_1919 PqiA family integral membrane protein (RefSeq) 0.35 Shewana3_3610 MarR family transcriptional regulator (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.29 MIT1002_01369 Paraquat-inducible protein A 0.24 MIT1002_01188 Salmolysin low > 70
Azospirillum sp. SherDot2 0.23 MPMX19_05101 Intermembrane transport protein PqiA 0.19 MPMX19_05304 Transcriptional regulator SlyA — —

Not shown: 6 genomes with orthologs for HER17_RS11980 only; 23 genomes with orthologs for HER17_RS09270 only