Conservation of cofitness between HER17_RS11655 and HER17_RS09270 in Pectobacterium carotovorum WPP14

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11655 peptidase T 1.0 HER17_RS09270 transcriptional regulator SlyA 0.76 7
Dickeya dianthicola 67-19 0.87 HGI48_RS11560 peptidase T 0.88 HGI48_RS12650 transcriptional regulator SlyA low > 71
Dickeya dianthicola ME23 0.87 DZA65_RS11895 peptidase T 0.88 DZA65_RS13105 transcriptional regulator SlyA low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS11515 peptidase T 0.88 DDA3937_RS12595 transcriptional regulator SlyA low > 74
Serratia liquefaciens MT49 0.82 IAI46_10375 peptidase T 0.73 IAI46_11340 transcriptional regulator SlyA low > 86
Rahnella sp. WP5 0.80 EX31_RS24545 peptidase T 0.70 EX31_RS13775 transcriptional regulator SlyA low > 89
Escherichia coli BW25113 0.80 b1127 pepT peptidase T (NCBI) 0.74 b1642 slyA transcriptional regulator for cryptic hemolysin (VIMSS) low > 76
Escherichia coli ECRC102 0.80 NIAGMN_24755 pepT peptidase T 0.73 NIAGMN_00590 slyA transcriptional regulator SlyA
Escherichia coli ECOR38 0.80 HEPCGN_24080 pepT peptidase T 0.72 HEPCGN_05860 slyA transcriptional regulator SlyA low > 87
Escherichia fergusonii Becca 0.80 EFB2_02848 Peptidase T 0.73 EFB2_02350 Transcriptional regulator SlyA low > 86
Escherichia coli ECRC100 0.80 OKFHMN_00630 pepT peptidase T 0.73 OKFHMN_27475 slyA transcriptional regulator SlyA
Escherichia coli ECRC98 0.80 JDDGAC_06735 pepT peptidase T 0.73 JDDGAC_02065 slyA transcriptional regulator SlyA low > 86
Escherichia coli ECOR27 0.80 NOLOHH_20930 pepT peptidase T 0.73 NOLOHH_17995 slyA transcriptional regulator SlyA
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06495 peptidase T 0.74 ECOLIN_RS09160 transcriptional regulator SlyA
Escherichia coli ECRC99 0.80 KEDOAH_24715 pepT peptidase T 0.73 KEDOAH_00630 slyA transcriptional regulator SlyA
Escherichia coli ECRC101 0.80 MCAODC_22455 pepT peptidase T 0.73 MCAODC_17935 slyA transcriptional regulator SlyA low > 87
Escherichia coli BL21 0.80 ECD_01125 peptidase T 0.74 ECD_01612 global transcriptional regulator
Escherichia coli ECRC62 0.80 BNILDI_19095 pepT peptidase T 0.73 BNILDI_16785 slyA transcriptional regulator SlyA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02541 Peptidase T 0.74 OHPLBJKB_02083 Transcriptional regulator SlyA low > 73
Enterobacter asburiae PDN3 0.79 EX28DRAFT_1803 peptidase T 0.73 EX28DRAFT_1639 Transcriptional regulators
Enterobacter sp. TBS_079 0.79 MPMX20_01808 Peptidase T 0.73 MPMX20_01995 Transcriptional regulator SlyA low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS11265 peptidase T 0.72 BWI76_RS16435 SlyA family transcriptional regulator
Pantoea sp. MT58 0.72 IAI47_11945 peptidase T 0.74 IAI47_10720 transcriptional regulator SlyA low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS14605 pepT peptidase T 0.70 LU632_RS11240 slyA transcriptional regulator SlyA
Shewanella loihica PV-4 0.55 Shew_3250 peptidase T (RefSeq) 0.36 Shew_1782 MarR family transcriptional regulator (RefSeq) 0.30 18
Rhizobium sp. OAE497 0.40 ABIE40_RS25635 peptidase T 0.24 ABIE40_RS14925 MarR family transcriptional regulator 0.47 106

Not shown: 12 genomes with orthologs for HER17_RS11655 only; 24 genomes with orthologs for HER17_RS09270 only