Conservation of cofitness between HER17_RS12165 and HER17_RS04095 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12165 citrate lyase subunit alpha 1.0 HER17_RS04095 2-hydroxy-3-oxopropionate reductase 0.77 11
Dickeya dadantii 3937 0.88 DDA3937_RS09790 citrate lyase subunit alpha 0.88 DDA3937_RS17035 2-hydroxy-3-oxopropionate reductase — —
Dickeya dianthicola ME23 0.87 DZA65_RS10115 citrate lyase subunit alpha 0.88 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS09805 citrate lyase subunit alpha 0.88 HGI48_RS17090 2-hydroxy-3-oxopropionate reductase 0.63 2
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3004 citrate lyase, alpha subunit 0.84 EX28DRAFT_3182 2-hydroxy-3-oxopropionate reductase low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03824 Citrate lyase alpha chain 0.86 MPMX20_04033 2-hydroxy-3-oxopropionate reductase low > 85
Rahnella sp. WP5 0.78 EX31_RS17800 citrate lyase subunit alpha 0.86 EX31_RS07980 2-hydroxy-3-oxopropionate reductase low > 89
Azospirillum sp. SherDot2 0.70 MPMX19_03125 Citrate lyase alpha chain 0.37 MPMX19_05813 2-hydroxy-3-oxopropionate reductase low > 112
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF219 Citrate lyase alpha chain (EC 4.1.3.6) 0.87 GFF1536 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) low > 78
Klebsiella michiganensis M5al 0.68 BWI76_RS04450 citrate lyase subunit alpha 0.86 BWI76_RS24825 2-hydroxy-3-oxopropionate reductase low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03090 Citrate lyase alpha chain 0.88 OHPLBJKB_00578 2-hydroxy-3-oxopropionate reductase low > 73
Escherichia coli ECOR27 0.66 NOLOHH_23835 citF citrate lyase subunit alpha 0.88 NOLOHH_10150 garR 2-hydroxy-3-oxopropionate reductase low > 75
Escherichia coli BL21 0.66 ECD_00583 citrate lyase, citrate-ACP transferase (alpha) subunit 0.88 ECD_02990 tartronate semialdehyde reductase low > 61
Escherichia coli ECRC62 0.66 BNILDI_21845 citF citrate lyase subunit alpha 0.88 BNILDI_01380 garR 2-hydroxy-3-oxopropionate reductase low > 75
Escherichia coli BW25113 0.66 b0615 citF citrate lyase, citrate-ACP transferase (alpha) subunit (NCBI) 0.88 b3125 garR tartronate semialdehyde reductase (RefSeq) low > 76
Escherichia coli ECOR38 0.66 HEPCGN_00815 citF citrate lyase subunit alpha 0.88 HEPCGN_17205 garR 2-hydroxy-3-oxopropionate reductase low > 87
Escherichia fergusonii Becca 0.66 EFB2_03476 Citrate lyase alpha chain 0.85 EFB2_00694 2-hydroxy-3-oxopropionate reductase low > 86
Escherichia coli Nissle 1917 0.66 ECOLIN_RS03360 citrate lyase subunit alpha 0.88 ECOLIN_RS17960 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC100 0.66 OKFHMN_07460 citF citrate lyase subunit alpha 0.88 OKFHMN_18370 garR 2-hydroxy-3-oxopropionate reductase low > 80
Escherichia coli ECRC99 0.66 KEDOAH_20510 citF citrate lyase subunit alpha 0.88 KEDOAH_09780 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC102 0.66 NIAGMN_05515 citF citrate lyase subunit alpha 0.88 NIAGMN_16130 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC101 0.66 MCAODC_26675 citF citrate lyase subunit alpha 0.88 MCAODC_08880 garR 2-hydroxy-3-oxopropionate reductase low > 87
Escherichia coli ECRC98 0.66 JDDGAC_11105 citF citrate lyase subunit alpha 0.88 JDDGAC_22000 garR 2-hydroxy-3-oxopropionate reductase low > 86
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_04130 citrate lyase subunit alpha 0.28 CSW01_14090 NAD(P)-dependent oxidoreductase low > 62
Dinoroseobacter shibae DFL-12 0.28 Dshi_1427 Citrate CoA-transferase (RefSeq) 0.28 Dshi_3047 6-phosphogluconate dehydrogenase NAD-binding (RefSeq) low > 64

Not shown: 2 genomes with orthologs for HER17_RS12165 only; 59 genomes with orthologs for HER17_RS04095 only