Conservation of cofitness between HER17_RS09975 and HER17_RS02855 in Pectobacterium carotovorum WPP14

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09975 type III secretion system export apparatus subunit SctS 1.0 HER17_RS02855 transcriptional activator NhaR 0.61 4
Dickeya dadantii 3937 0.72 DDA3937_RS11700 type III secretion system export apparatus subunit SctS 0.81 DDA3937_RS18355 transcriptional activator NhaR — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4537 Type III secretion inner membrane protein (YscS,homologous to flagellar export components) 0.35 Pf6N2E2_2228 Transcriptional regulator, LysR family 0.18 2
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS03555 EscS/YscS/HrcS family type III secretion system export apparatus protein 0.35 PFLU_RS10530 transcriptional activator NhaR low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS03555 EscS/YscS/HrcS family type III secretion system export apparatus protein 0.35 PFLU_RS10530 transcriptional activator NhaR low > 109
Pseudomonas simiae WCS417 0.66 PS417_03495 type III secretory protein EscS 0.35 PS417_10445 LysR family transcriptional regulator low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1207 type III secretion protein HrcS 0.37 Psyr_2422 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1207 type III secretion protein HrcS 0.37 Psyr_2422 transcriptional regulator, LysR family — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS03980 type III secretion HrcS protein 0.30 HSERO_RS19615 LysR family transcriptional regulator low > 78
Escherichia coli ECRC102 0.39 NIAGMN_13055 escS type III secretion system LEE export apparatus protein EscS 0.79 NIAGMN_08875 nhaR transcriptional activator NhaR — —
Escherichia coli ECRC101 0.39 MCAODC_05805 escS type III secretion system LEE export apparatus protein EscS 0.79 MCAODC_01540 nhaR transcriptional activator NhaR — —
Escherichia coli ECRC98 0.39 JDDGAC_18920 escS type III secretion system LEE export apparatus protein EscS 0.79 JDDGAC_14620 nhaR transcriptional activator NhaR low > 86
Escherichia coli ECRC99 0.39 KEDOAH_12850 escS type III secretion system LEE export apparatus protein EscS 0.79 KEDOAH_17130 nhaR transcriptional activator NhaR — —
Escherichia coli ECRC100 0.39 OKFHMN_15295 escS type III secretion system LEE export apparatus protein EscS 0.79 OKFHMN_11025 nhaR transcriptional activator NhaR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00857 hypothetical protein 0.79 OHPLBJKB_03641 Transcriptional activator protein NhaR low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF500 Type III secretion inner membrane protein (YscS,homologous to flagellar export components) 0.25 GFF1910 Cys regulon transcriptional activator CysB low > 90
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS25890 type III secretion protein 0.29 BPHYT_RS10255 LysR family transcriptional regulator — —
Paraburkholderia graminis OAS925 0.33 ABIE53_006036 type III secretion protein S 0.29 ABIE53_004867 LysR family transcriptional activator of nhaA low > 113

Not shown: 6 genomes with orthologs for HER17_RS09975 only; 37 genomes with orthologs for HER17_RS02855 only