Conservation of cofitness between HER17_RS12895 and HER17_RS01320 in Pectobacterium carotovorum WPP14

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12895 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 1.0 HER17_RS01320 class I adenylate cyclase 0.75 16
Serratia liquefaciens MT49 0.80 IAI46_17305 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.84 IAI46_00700 class I adenylate cyclase low > 86
Erwinia tracheiphila SCR3 0.75 LU632_RS17465 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.80 LU632_RS24155 class I adenylate cyclase low > 74
Rahnella sp. WP5 0.74 EX31_RS19120 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 EX31_RS15150 class I adenylate cyclase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF3761 Lipoprotein spr precursor 0.82 GFF230 Adenylate cyclase (EC 4.6.1.1) 0.79 5
Dickeya dadantii 3937 0.72 DDA3937_RS09195 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 DDA3937_RS19915 class I adenylate cyclase low > 74
Enterobacter sp. TBS_079 0.72 MPMX20_03141 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.83 MPMX20_04469 Adenylate cyclase low > 85
Dickeya dianthicola ME23 0.72 DZA65_RS09540 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 DZA65_RS21115 class I adenylate cyclase low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS09235 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 HGI48_RS20070 class I adenylate cyclase low > 71
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0386 Cell wall-associated hydrolases (invasion-associated proteins) 0.83 EX28DRAFT_4475 Adenylate cyclase low > 76
Escherichia coli Nissle 1917 0.71 ECOLIN_RS12720 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 ECOLIN_RS21840 class I adenylate cyclase low > 55
Escherichia coli ECRC102 0.71 NIAGMN_21165 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 NIAGMN_12200 cyaA class I adenylate cyclase — —
Escherichia coli ECRC99 0.71 KEDOAH_04785 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 KEDOAH_13705 cyaA class I adenylate cyclase — —
Escherichia coli ECRC100 0.71 OKFHMN_23400 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 OKFHMN_14445 cyaA class I adenylate cyclase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01534 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.83 OHPLBJKB_04247 Adenylate cyclase low > 73
Escherichia coli ECRC62 0.71 BNILDI_13895 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 BNILDI_04945 cyaA class I adenylate cyclase low > 75
Escherichia coli BW25113 0.71 b2175 spr predicted peptidase, outer membrane lipoprotein (NCBI) 0.83 b3806 cyaA adenylate cyclase (NCBI) low > 76
Escherichia coli ECOR38 0.71 HEPCGN_22665 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 HEPCGN_13165 cyaA class I adenylate cyclase low > 87
Escherichia coli ECRC98 0.71 JDDGAC_27360 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 JDDGAC_18070 cyaA class I adenylate cyclase low > 86
Escherichia coli ECOR27 0.71 NOLOHH_14975 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 NOLOHH_06590 cyaA class I adenylate cyclase low > 75
Escherichia coli ECRC101 0.71 MCAODC_14450 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 MCAODC_04950 cyaA class I adenylate cyclase low > 87
Escherichia fergusonii Becca 0.71 EFB2_01681 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.83 EFB2_04832 Adenylate cyclase low > 86
Escherichia coli BL21 0.71 ECD_02105 murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase 0.83 ECD_03681 adenylate cyclase low > 61
Klebsiella michiganensis M5al 0.71 BWI76_RS19770 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 BWI76_RS01185 adenylate cyclase low > 92
Pantoea sp. MT58 0.67 IAI47_06625 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 IAI47_18420 class I adenylate cyclase low > 76
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_19115 peptidase P60 0.24 AO356_12760 adenylate cyclase low > 104

Not shown: 9 genomes with orthologs for HER17_RS12895 only; 9 genomes with orthologs for HER17_RS01320 only