Conservation of cofitness between HER17_RS20975 and HER17_RS01040 in Pectobacterium carotovorum WPP14

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20975 aldehyde dehydrogenase 1.0 HER17_RS01040 HTH-type transcriptional regulator HdfR 0.54 8
Rahnella sp. WP5 0.93 EX31_RS00250 aldehyde dehydrogenase 0.77 EX31_RS14970 HTH-type transcriptional regulator HdfR low > 89
Pantoea sp. MT58 0.79 IAI47_09665 aldehyde dehydrogenase 0.72 IAI47_01000 HTH-type transcriptional regulator HdfR low > 76
Escherichia coli ECRC62 0.76 BNILDI_17835 aldA aldehyde dehydrogenase 0.62 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli ECOR38 0.76 HEPCGN_26120 aldA aldehyde dehydrogenase 0.62 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR low > 87
Escherichia coli ECRC98 0.76 JDDGAC_04190 aldA aldehyde dehydrogenase 0.62 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR low > 86
Escherichia coli ECOR27 0.76 NOLOHH_19380 aldA aldehyde dehydrogenase 0.62 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_02299 Lactaldehyde dehydrogenase 0.62 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR low > 73
Escherichia coli ECRC99 0.76 KEDOAH_26740 aldA aldehyde dehydrogenase 0.62 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECRC100 0.76 OKFHMN_01700 aldA aldehyde dehydrogenase 0.62 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR low > 80
Escherichia coli ECRC102 0.76 NIAGMN_25835 aldA aldehyde dehydrogenase 0.62 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECRC101 0.76 MCAODC_16235 aldA aldehyde dehydrogenase 0.62 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR low > 87
Escherichia fergusonii Becca 0.75 EFB2_02563 Lactaldehyde dehydrogenase 0.63 EFB2_04871 HTH-type transcriptional regulator HdfR low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS08190 aldehyde dehydrogenase 0.63 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR — —
Escherichia coli BL21 0.75 ECD_01370 aldehyde dehydrogenase A, NAD-linked 0.62 ECD_03642 flhDC operon transcriptional repressor low > 61
Escherichia coli BW25113 0.75 b1415 aldA Lactaldehyde / glycolaldehyde dehydrogenase aldA (EC 1.2.1.22; EC 1.2.1.21) (from data) 0.62 b4480 hdfR transcriptional regulator HdfR (NCBI) low > 76
Klebsiella michiganensis M5al 0.75 BWI76_RS13210 aldehyde dehydrogenase 0.64 BWI76_RS00940 transcriptional regulator HdfR low > 92
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_26145 aldehyde dehydrogenase 0.19 AO356_00585 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_3932 Aldehyde dehydrogenase A (EC 1.2.1.22) 0.21 PfGW456L13_2837 HTH-type transcriptional regulator hdfR low > 87
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_1102 Aldehyde dehydrogenase A (EC 1.2.1.22) 0.19 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR low > 103

Not shown: 8 genomes with orthologs for HER17_RS20975 only; 26 genomes with orthologs for HER17_RS01040 only