Conservation of cofitness between HEPCGN_04445 and HEPCGN_23880 in Escherichia coli ECOR38

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04445 xerD integrase 1.0 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD 0.59 4
Escherichia coli ECRC101 1.00 MCAODC_19380 xerD integrase 1.00 MCAODC_22960 yceD 23S rRNA accumulation protein YceD low > 87
Escherichia coli ECRC99 1.00 KEDOAH_02080 xerD integrase 1.00 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD — —
Escherichia coli ECRC100 1.00 OKFHMN_26010 xerD integrase 1.00 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD low > 80
Escherichia coli ECRC98 1.00 JDDGAC_00600 xerD integrase 1.00 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD low > 86
Escherichia coli ECRC102 0.99 NIAGMN_02040 xerD integrase 1.00 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD — —
Pectobacterium carotovorum WPP14 0.64 HER17_RS07965 tyrosine-type recombinase/integrase 0.84 HER17_RS08625 23S rRNA accumulation protein YceD low > 75
Pantoea sp. MT58 0.53 IAI47_02995 tyrosine-type recombinase/integrase 0.79 IAI47_12095 23S rRNA accumulation protein YceD — —
Dickeya dianthicola 67-19 0.52 HGI48_RS02890 tyrosine-type recombinase/integrase 0.82 HGI48_RS13210 23S rRNA accumulation protein YceD low > 71
Enterobacter sp. TBS_079 0.51 MPMX20_03950 Tyrosine recombinase XerC 0.94 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD low > 85
Escherichia coli ECRC62 0.51 BNILDI_11500 xerD integrase 1.00 BNILDI_19290 yceD 23S rRNA accumulation protein YceD 0.85 5
Escherichia coli BL21 0.47 ECD_00815 integrase for prophage 1.00 ECD_01084 DUF177 family protein low > 61
Pseudomonas stutzeri RCH2 0.39 Psest_2903 Site-specific recombinase XerD 0.27 Psest_1684 Predicted metal-binding, possibly nucleic acid-binding protein — —
Marinobacter adhaerens HP15 0.35 HP15_3093 phage integrase family protein 0.25 HP15_2217 protein containing DUF177 — —
Rahnella sp. WP5 0.33 EX31_RS18465 tyrosine-type recombinase/integrase 0.85 EX31_RS24410 23S rRNA accumulation protein YceD low > 89
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_11165 integrase 0.50 CSW01_10120 23S rRNA accumulation protein YceD — —

Not shown: 4 genomes with orthologs for HEPCGN_04445 only; 36 genomes with orthologs for HEPCGN_23880 only