Conservation of cofitness between HEPCGN_02960 and HEPCGN_20160 in Escherichia coli ECOR38

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_02960 alkA DNA-3-methyladenine glycosylase 2 1.0 HEPCGN_20160 gabP GABA permease 0.48 53
Escherichia coli ECRC62 0.97 BNILDI_14505 alkA DNA-3-methyladenine glycosylase 2 1.00 BNILDI_11290 gabP GABA permease low > 75
Escherichia coli ECOR27 0.97 NOLOHH_15600 alkA DNA-3-methyladenine glycosylase 2 1.00 NOLOHH_12730 gabP GABA permease low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.96 OHPLBJKB_01637 DNA-3-methyladenine glycosylase 2 1.00 OHPLBJKB_01069 GABA permease low > 73
Escherichia coli ECRC102 0.95 NIAGMN_22200 alkA DNA-3-methyladenine glycosylase 2 1.00 NIAGMN_18670 gabP GABA permease — —
Escherichia coli ECRC100 0.95 OKFHMN_24255 alkA DNA-3-methyladenine glycosylase 2 1.00 OKFHMN_20905 gabP GABA permease low > 80
Escherichia fergusonii Becca 0.95 EFB2_01786 DNA-3-methyladenine glycosylase 2 1.00 EFB2_01267 GABA permease low > 86
Escherichia coli Nissle 1917 0.95 ECOLIN_RS12170 DNA-3-methyladenine glycosylase 2 1.00 ECOLIN_RS14850 GABA permease — —
Escherichia coli ECRC98 0.95 JDDGAC_28365 alkA DNA-3-methyladenine glycosylase 2 1.00 JDDGAC_24565 gabP GABA permease low > 86
Escherichia coli ECRC101 0.95 MCAODC_20685 alkA DNA-3-methyladenine glycosylase 2 1.00 MCAODC_11425 gabP GABA permease low > 87
Escherichia coli BW25113 0.95 b2068 alkA 3-methyl-adenine DNA glycosylase II (NCBI) 1.00 b2663 gabP gamma-aminobutyrate transporter (NCBI) low > 76
Escherichia coli ECRC99 0.95 KEDOAH_03895 alkA DNA-3-methyladenine glycosylase 2 1.00 KEDOAH_07235 gabP GABA permease — —
Escherichia coli BL21 0.95 ECD_01974 3-methyl-adenine DNA glycosylase II 1.00 ECD_02519 gamma-aminobutyrate transporter low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF3858 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.93 GFF1568 gamma-aminobutyrate (GABA) permease low > 78
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS29605 DNA-3-methyladenine glycosylase 0.50 QEN71_RS31450 amino acid permease low > 153
Pseudomonas simiae WCS417 0.27 PS417_22315 DNA-3-methyladenine glycosylase 0.66 PS417_01505 gamma-aminobutyrate transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS23955 DNA-3-methyladenine glycosylase 2 family protein 0.65 PFLU_RS01545 GABA permease low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS23955 DNA-3-methyladenine glycosylase 2 family protein 0.65 PFLU_RS01545 GABA permease low > 109
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS19685 DNA-3-methyladenine glycosylase 0.42 BPHYT_RS21680 amino acid permease-associated protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_02338 DNA-3-methyladenine glycosylase II 0.33 H281DRAFT_01668 gamma-aminobutyrate:proton symporter, AAT family low > 103
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_03460 3-methyladenine DNA glycosylase 2 0.64 AO353_12005 GABA permease low > 101
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_612 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.62 Pf1N1B4_1639 transport permease protein of gamma-aminobutyrate low > 87
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_1877 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.65 PfGW456L13_375 transport permease protein of gamma-aminobutyrate low > 87

Not shown: 6 genomes with orthologs for HEPCGN_02960 only; 12 genomes with orthologs for HEPCGN_20160 only