Conservation of cofitness between GFF3613 and GFF662 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3613 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 1.0 GFF662 Pectinesterase (EC 3.1.1.11) 0.75 14
Enterobacter sp. TBS_079 0.92 MPMX20_01973 Multidrug resistance protein MdtK 0.84 MPMX20_01395 Putative acyl-CoA thioester hydrolase YbhC low > 85
Escherichia coli ECRC102 0.92 NIAGMN_00705 mdtK multidrug efflux MATE transporter MdtK 0.89 NIAGMN_04700 ybhC putative acyl-CoA thioester hydrolase
Escherichia coli ECRC98 0.92 JDDGAC_01950 mdtK multidrug efflux MATE transporter MdtK 0.89 JDDGAC_10305 ybhC putative acyl-CoA thioester hydrolase low > 86
Escherichia coli ECRC99 0.92 KEDOAH_00750 mdtK multidrug efflux MATE transporter MdtK 0.88 KEDOAH_21315 ybhC putative acyl-CoA thioester hydrolase
Escherichia coli ECRC101 0.92 MCAODC_18050 mdtK multidrug efflux MATE transporter MdtK 0.89 MCAODC_25870 ybhC putative acyl-CoA thioester hydrolase low > 87
Escherichia coli ECRC100 0.92 OKFHMN_27360 mdtK multidrug efflux MATE transporter MdtK 0.89 OKFHMN_06650 ybhC putative acyl-CoA thioester hydrolase low > 80
Escherichia fergusonii Becca 0.92 EFB2_02329 Multidrug resistance protein MdtK 0.89 EFB2_03334 Putative acyl-CoA thioester hydrolase YbhC low > 86
Escherichia coli Nissle 1917 0.92 ECOLIN_RS09270 multidrug efflux MATE transporter MdtK 0.89 ECOLIN_RS04110 putative acyl-CoA thioester hydrolase
Escherichia coli BW25113 0.92 b1663 mdtK multidrug efflux protein NorM (NCBI) 0.89 b0772 ybhC predicted pectinesterase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02061 Multidrug resistance protein MdtK 0.89 OHPLBJKB_02941 Putative acyl-CoA thioester hydrolase YbhC low > 73
Escherichia coli ECOR38 0.92 HEPCGN_05745 mdtK multidrug efflux MATE transporter MdtK 0.89 HEPCGN_01625 ybhC putative acyl-CoA thioester hydrolase low > 87
Escherichia coli ECOR27 0.92 NOLOHH_17880 mdtK multidrug efflux MATE transporter MdtK 0.89 NOLOHH_23075 ybhC putative acyl-CoA thioester hydrolase low > 75
Escherichia coli BL21 0.92 ECD_01634 multidrug efflux system transporter 0.88 ECD_00725 acyl-CoA thioesterase, lipoprotein low > 61
Klebsiella michiganensis M5al 0.91 BWI76_RS16535 MATE family efflux transporter 0.82 BWI76_RS08715 acyl-CoA thioesterase low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_1660 putative efflux protein, MATE family 0.83 EX28DRAFT_2224 Pectin methylesterase 0.59 55
Dickeya dianthicola 67-19 0.74 HGI48_RS12700 MATE family efflux transporter 0.42 HGI48_RS08990 putative acyl-CoA thioester hydrolase low > 71
Dickeya dianthicola ME23 0.74 DZA65_RS13155 MATE family efflux transporter 0.42 DZA65_RS09295 putative acyl-CoA thioester hydrolase low > 75
Pectobacterium carotovorum WPP14 0.73 HER17_RS09220 MATE family efflux transporter 0.40 HER17_RS21040 putative acyl-CoA thioester hydrolase low > 75
Rahnella sp. WP5 0.71 EX31_RS13855 MATE family efflux transporter 0.38 EX31_RS23650 putative acyl-CoA thioester hydrolase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.4760.1 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM 0.16 Xcc-8004.2293.1 Pectinesterase (EC 3.1.1.11) low > 74
Ralstonia solanacearum GMI1000 0.22 RS_RS05915 MATE family efflux transporter 0.16 RS_RS17810 pectinesterase
Ralstonia solanacearum PSI07 0.21 RPSI07_RS18275 MATE family efflux transporter 0.13 RPSI07_RS00465 acyl-CoA thioesterase low > 81

Not shown: 71 genomes with orthologs for GFF3613 only; 1 genomes with orthologs for GFF662 only