Conservation of cofitness between GFF518 and GFF4454 in Hydrogenophaga sp. GW460-11-11-14-LB1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF518 Transcriptional regulator 1.0 GFF4454 Transcriptional regulator, LacI family 0.55 20
Variovorax sp. SCN45 0.75 GFF4595 Transcriptional regulator 0.24 GFF2137 Ribose operon repressor low > 127
Variovorax sp. OAS795 0.74 ABID97_RS05925 LysR substrate-binding domain-containing protein 0.25 ABID97_RS24770 LacI family DNA-binding transcriptional regulator low > 91
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS19265 LysR family transcriptional regulator 0.25 HSERO_RS11495 LacI family transcription regulator low > 78
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_2946 Transcriptional regulator 0.25 Ga0059261_0555 transcriptional regulator, LacI family low > 68
Agrobacterium fabrum C58 0.34 Atu2512 transcriptional regulator, LysR family 0.24 Atu4373 LacI family transcriptional regulator low > 89
Sinorhizobium meliloti 1021 0.29 SMa0097 LysR family transcriptional regulator 0.24 SM_b20014 transcriptional regulator low > 103
Rahnella sp. WP5 0.28 EX31_RS05520 LysR family transcriptional regulator 0.24 EX31_RS06195 ribose operon transcriptional repressor RbsR low > 89
Escherichia coli ECOR27 0.25 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 NOLOHH_06860 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE 0.24 OHPLBJKB_04117 HTH-type transcriptional repressor CytR low > 73
Escherichia coli ECRC62 0.25 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 BNILDI_04665 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECOR38 0.25 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 HEPCGN_13435 rbsR ribose operon transcriptional repressor RbsR low > 85
Escherichia coli BW25113 0.25 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) 0.25 b3753 rbsR DNA-binding transcriptional repressor of ribose metabolism (NCBI) low > 76
Escherichia coli BL21 0.25 ECD_04196 hypochlorite-responsive transcription factor 0.25 ECD_03639 transcriptional repressor of ribose metabolism low > 60
Escherichia fergusonii Becca 0.25 EFB2_04117 HTH-type transcriptional regulator YjiE 0.25 EFB2_04880 Ribose operon repressor low > 86
Escherichia coli Nissle 1917 0.25 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 ECOLIN_RS21575 ribose operon transcriptional repressor RbsR low > 52
Klebsiella michiganensis M5al 0.20 BWI76_RS17610 LysR family transcriptional regulator 0.26 BWI76_RS07435 LacI family transcriptional regulator low > 92
Dickeya dianthicola 67-19 0.20 HGI48_RS07255 hypochlorite stress DNA-binding transcriptional regulator HypT 0.24 HGI48_RS21310 ribose operon transcriptional repressor RbsR low > 71
Dickeya dadantii 3937 0.19 DDA3937_RS07390 hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 DDA3937_RS00055 ribose operon transcriptional repressor RbsR low > 74
Escherichia coli ECRC99 0.16 KEDOAH_16615 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 KEDOAH_13425 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC101 0.16 MCAODC_02045 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 MCAODC_05230 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC102 0.16 NIAGMN_09380 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 NIAGMN_12480 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC101 0.16 OKFHMN_11530 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 OKFHMN_14725 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC98 0.16 JDDGAC_15125 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.25 JDDGAC_18345 rbsR ribose operon transcriptional repressor RbsR — —

Not shown: 27 genomes with orthologs for GFF518 only; 26 genomes with orthologs for GFF4454 only