Conservation of cofitness between GFF1934 and GFF417 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1934 tRNA pseudouridine synthase A (EC 4.2.1.70) 1.0 GFF417 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) 0.80 19
Escherichia coli BW25113 0.97 b2318 truA tRNA pseudouridine synthase A (NCBI) 0.94 b3600 mtlD mannitol-1-phosphate 5-dehydrogenase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_01387 tRNA pseudouridine synthase A 0.94 OHPLBJKB_00102 Mannitol-1-phosphate 5-dehydrogenase low > 73
Escherichia coli ECOR27 0.97 NOLOHH_14305 truA tRNA pseudouridine(38-40) synthase TruA 0.93 NOLOHH_07690 mtlD mannitol-1-phosphate 5-dehydrogenase low > 57
Escherichia coli BL21 0.97 ECD_02243 tRNA pseudouridine(38-40) synthase 0.94 ECD_03455 mannitol-1-phosphate dehydrogenase, NAD-dependent
Escherichia coli Nissle 1917 0.96 ECOLIN_RS13435 tRNA pseudouridine(38-40) synthase TruA 0.94 ECOLIN_RS20540 mannitol-1-phosphate 5-dehydrogenase low > 52
Escherichia coli ECOR38 0.96 HEPCGN_21875 truA aspartate-semialdehyde dehydrogenase 0.94 HEPCGN_14650 mtlD mannitol-1-phosphate 5-dehydrogenase low > 85
Escherichia coli ECRC101 0.96 MCAODC_13710 truA aspartate-semialdehyde dehydrogenase 0.93 MCAODC_06320 mtlD mannitol-1-phosphate 5-dehydrogenase
Escherichia coli ECRC101 0.96 OKFHMN_22670 truA aspartate-semialdehyde dehydrogenase 0.93 OKFHMN_15810 mtlD mannitol-1-phosphate 5-dehydrogenase
Escherichia coli ECRC102 0.96 NIAGMN_20445 truA aspartate-semialdehyde dehydrogenase 0.93 NIAGMN_13570 mtlD mannitol-1-phosphate 5-dehydrogenase
Escherichia coli ECRC99 0.96 KEDOAH_05525 truA aspartate-semialdehyde dehydrogenase 0.93 KEDOAH_12340 mtlD mannitol-1-phosphate 5-dehydrogenase
Escherichia coli ECRC98 0.96 JDDGAC_26630 truA aspartate-semialdehyde dehydrogenase 0.93 JDDGAC_19435 mtlD mannitol-1-phosphate 5-dehydrogenase
Escherichia coli ECRC62 0.96 BNILDI_13225 truA tRNA pseudouridine(38-40) synthase TruA 0.93 BNILDI_03825 mtlD mannitol-1-phosphate 5-dehydrogenase
Escherichia fergusonii Becca 0.96 EFB2_01540 tRNA pseudouridine synthase A 0.93 EFB2_00213 Mannitol-1-phosphate 5-dehydrogenase low > 86
Enterobacter sp. TBS_079 0.92 MPMX20_03253 tRNA pseudouridine synthase A 0.93 MPMX20_00134 Mannitol-1-phosphate 5-dehydrogenase low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0286 tRNA pseudouridine(38-40) synthase 0.94 EX28DRAFT_3850 Mannitol-1-phosphate/altronate dehydrogenases
Klebsiella michiganensis M5al 0.90 BWI76_RS20380 tRNA pseudouridine(38-40) synthase TruA 0.93 BWI76_RS27165 mannitol-1-phosphate 5-dehydrogenase low > 92
Pectobacterium carotovorum WPP14 0.81 HER17_RS06990 tRNA pseudouridine(38-40) synthase TruA 0.76 HER17_RS21130 mannitol-1-phosphate 5-dehydrogenase low > 75
Pantoea sp. MT58 0.80 IAI47_06245 tRNA pseudouridine(38-40) synthase TruA 0.82 IAI47_18705 mannitol-1-phosphate 5-dehydrogenase low > 76
Erwinia tracheiphila SCR3 0.80 LU632_RS07825 truA tRNA pseudouridine(38-40) synthase TruA 0.76 LU632_RS00145 mannitol-1-phosphate 5-dehydrogenase
Serratia liquefaciens MT49 0.80 IAI46_17840 tRNA pseudouridine(38-40) synthase TruA 0.77 IAI46_00160 mannitol-1-phosphate 5-dehydrogenase low > 86
Dickeya dianthicola ME23 0.79 DZA65_RS15370 tRNA pseudouridine(38-40) synthase TruA 0.76 DZA65_RS00270 mannitol-1-phosphate 5-dehydrogenase low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS14435 tRNA pseudouridine(38-40) synthase TruA 0.76 HGI48_RS00265 mannitol-1-phosphate 5-dehydrogenase low > 71
Dickeya dadantii 3937 0.79 DDA3937_RS14465 tRNA pseudouridine(38-40) synthase TruA 0.76 DDA3937_RS20975 mannitol-1-phosphate 5-dehydrogenase low > 74
Rahnella sp. WP5 0.73 EX31_RS19600 tRNA pseudouridine(38-40) synthase TruA 0.77 EX31_RS05825 mannitol-1-phosphate 5-dehydrogenase low > 89
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_05090 tRNA pseudouridine(38-40) synthase TruA 0.60 CSW01_19320 mannitol-1-phosphate 5-dehydrogenase low > 62

Not shown: 77 genomes with orthologs for GFF1934 only; 0 genomes with orthologs for GFF417 only