Conservation of cofitness between GFF3787 and GFF39 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3787 Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator 1.0 GFF39 Ribonuclease HII (EC 3.1.26.4) 0.42 12
Escherichia coli ECOR27 0.90 NOLOHH_15100 galS HTH-type transcriptional regulator GalS 0.94 NOLOHH_02485 rnhB ribonuclease HII low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_01560 HTH-type transcriptional regulator GalS 0.94 OHPLBJKB_03480 Ribonuclease HII low > 73
Escherichia coli BW25113 0.89 b2151 galS DNA-binding transcriptional repressor (NCBI) 0.94 b0183 rnhB ribonuclease HII (NCBI) low > 76
Escherichia coli ECRC99 0.89 KEDOAH_04660 galS HTH-type transcriptional regulator GalS 0.93 KEDOAH_18015 rnhB ribonuclease HII — —
Escherichia coli ECRC98 0.89 JDDGAC_27485 galS HTH-type transcriptional regulator GalS 0.93 JDDGAC_13735 rnhB ribonuclease HII low > 86
Enterobacter sp. TBS_079 0.89 MPMX20_03121 HTH-type transcriptional regulator GalS 0.92 MPMX20_00867 Ribonuclease HII low > 85
Escherichia coli ECRC100 0.89 OKFHMN_23525 galS HTH-type transcriptional regulator GalS 0.93 OKFHMN_10140 rnhB ribonuclease HII low > 80
Escherichia coli ECRC101 0.89 MCAODC_14575 galS HTH-type transcriptional regulator GalS 0.93 MCAODC_00655 rnhB ribonuclease HII low > 87
Escherichia coli ECRC102 0.89 NIAGMN_21290 galS HTH-type transcriptional regulator GalS 0.93 NIAGMN_07990 rnhB ribonuclease HII — —
Escherichia coli Nissle 1917 0.89 ECOLIN_RS12585 HTH-type transcriptional regulator GalS 0.94 ECOLIN_RS00995 ribonuclease HII — —
Escherichia fergusonii Becca 0.89 EFB2_01705 HTH-type transcriptional regulator GalS 0.94 EFB2_03861 Ribonuclease HII low > 86
Escherichia coli ECOR38 0.89 HEPCGN_22795 galS HTH-type transcriptional regulator GalS 0.93 HEPCGN_08095 rnhB ribonuclease HII low > 87
Escherichia coli ECRC62 0.89 BNILDI_14020 galS HTH-type transcriptional regulator GalS 0.94 BNILDI_09185 rnhB ribonuclease HII low > 75
Escherichia coli BL21 0.89 ECD_02080 galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor 0.94 ECD_00181 ribonuclease HII low > 61
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0406 Transcriptional regulators 0.90 EX28DRAFT_3771 RNase HII (EC 3.1.26.4) low > 76
Klebsiella michiganensis M5al 0.86 BWI76_RS19650 DNA-binding transcriptional regulator GalS 0.87 BWI76_RS05285 ribonuclease HII — —
Pantoea sp. MT58 0.78 IAI47_06730 HTH-type transcriptional regulator GalS 0.83 IAI47_15460 ribonuclease HII low > 76
Dickeya dianthicola ME23 0.77 DZA65_RS06410 HTH-type transcriptional regulator GalS 0.82 DZA65_RS05525 ribonuclease HII — —
Dickeya dianthicola 67-19 0.77 HGI48_RS06060 HTH-type transcriptional regulator GalS 0.82 HGI48_RS05185 ribonuclease HII — —
Dickeya dadantii 3937 0.77 DDA3937_RS06015 HTH-type transcriptional regulator GalS 0.82 DDA3937_RS05185 ribonuclease HII low > 74
Erwinia tracheiphila SCR3 0.75 LU632_RS08515 galS HTH-type transcriptional regulator GalS 0.78 LU632_RS19895 rnhB ribonuclease HII — —
Rahnella sp. WP5 0.72 EX31_RS18690 HTH-type transcriptional regulator GalS 0.79 EX31_RS12965 ribonuclease HII low > 89
Serratia liquefaciens MT49 0.72 IAI46_07910 HTH-type transcriptional regulator GalS 0.84 IAI46_20190 ribonuclease HII low > 86
Alteromonas macleodii MIT1002 0.40 MIT1002_00186 Mgl repressor and galactose ultrainduction factor 0.59 MIT1002_01017 Ribonuclease HII low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS03600 LacI family DNA-binding transcriptional regulator 0.43 A4249_RS09510 ribonuclease HII low > 48
Shewanella loihica PV-4 0.21 Shew_1111 LacI family transcription regulator (RefSeq) 0.58 Shew_2621 ribonuclease H (RefSeq) low > 60

Not shown: 0 genomes with orthologs for GFF3787 only; 63 genomes with orthologs for GFF39 only