Conservation of cofitness between GFF504 and GFF3553 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF504 Putative regulator 1.0 GFF3553 Putative membrane protein 0.47 20
Escherichia fergusonii Becca 0.75 EFB2_00288 Putative HTH-type transcriptional regulator YhjB 0.88 EFB2_02304 Putative transport protein YdiK low > 86
Escherichia coli BL21 0.75 ECD_03368 putative DNA-binding transcriptional response regulator 0.88 ECD_01657 UPF0118 family inner membrane protein low > 60
Escherichia coli BW25113 0.75 b3520 yhjB predicted DNA-binding response regulator in two-component regulatory system (NCBI) 0.88 b1688 ydiK predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.75 NOLOHH_08200 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 NOLOHH_17745 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC62 0.75 BNILDI_03355 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 BNILDI_16535 ydiK AI-2E family transporter YdiK — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00182 Putative HTH-type transcriptional regulator YhjB 0.88 OHPLBJKB_02036 Putative transport protein YdiK low > 73
Escherichia coli ECOR38 0.75 HEPCGN_15140 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 HEPCGN_05610 ydiK AI-2E family transporter YdiK low > 85
Escherichia coli ECRC101 0.74 MCAODC_06750 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 MCAODC_18185 ydiK AI-2E family transporter YdiK — —
Escherichia coli Nissle 1917 0.74 ECOLIN_RS20135 response regulator transcription factor 0.88 ECOLIN_RS09435 AI-2E family transporter YdiK — —
Escherichia coli ECRC102 0.74 NIAGMN_14000 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 NIAGMN_00840 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC101 0.74 OKFHMN_16235 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 OKFHMN_27225 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC99 0.74 KEDOAH_11910 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 KEDOAH_00885 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC98 0.74 JDDGAC_19865 yhjB Putative HTH-type transcriptional regulator YhjB 0.88 JDDGAC_01800 ydiK AI-2E family transporter YdiK — —
Klebsiella michiganensis M5al 0.56 BWI76_RS26715 helix-turn-helix transcriptional regulator 0.76 BWI76_RS17055 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.48 MPMX20_04404 Putative HTH-type transcriptional regulator YhjB 0.81 MPMX20_01925 Putative transport protein YdiK low > 85
Pectobacterium carotovorum WPP14 0.32 HER17_RS18230 response regulator transcription factor 0.65 HER17_RS08900 AI-2E family transporter YdiK low > 75
Enterobacter asburiae PDN3 0.30 EX28DRAFT_4257 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.79 EX28DRAFT_1697 Predicted permease low > 76
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS14200 response regulator transcription factor 0.09 ABZR87_RS08310 AI-2E family transporter low > 80
Shewanella oneidensis MR-1 0.20 SO3305 DNA-binding response regulator, LuxR family (NCBI ptt file) 0.11 SO0472 membrane protein, putative (NCBI ptt file) low > 76
Sinorhizobium meliloti 1021 0.20 SM_b20162 transcriptional regulator 0.20 SMa0665 hypothetical protein low > 103

Not shown: 2 genomes with orthologs for GFF504 only; 43 genomes with orthologs for GFF3553 only